Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00675 ATGCCAACTGACACGTCATCAGTTTCCGGCCAAACTGTCTGCGTGACCGGTGCCGGCGGGTACATAGCCTCTTGGCTTGTGAAACTTCTCTTAGAGAAAGGGTACACTGTGAGAGGAACCTTGCGAAACCCAGATGATCCGAAGAATGGTCATTTGAAAAAGTTGGAAGGAGCGAAGGAGAGACTAACTCTGCATAGAGTTGATCTCTTGGATATTGACTCCATTAAAGCCGCTTTTCACGGTTGCCACGGCGTCTTCCACACCGCTTCTCCGGTCACCGACAACCCCGAAGAGATGGTGGAGCCAGCAGTGAAGGGAACGAAGAATGTGATAATAGGAGCTGCAGAAGCAAAAGTGCGACGCGTGGTGTTCACTTCGTCGATTGGGACGGTGTATATGAACCCCAACACGAGTAGGGATGTGTTGGTTGATGAATCATTCTGGAGTGATTTGGAGTACTGCAAGAACACCAAGAATTGGTATTGCTATGGGAAGACGGTGGCTGAACAATCAGCATGGGATATAGCTAAAGAGAGAGGAGTGGATTTGGTTGTGGTGAACCCAGTTGTGGTCATTGGGCCATTGCTTCAACCAACCATTAATGCTAGTACAATTCACATCCTAAAGTACCTTACTGGCTCTGCTAAGACTTATGTAAATGCCACACAGTCTTACGTACATGTCAAGGATGTGGCATTAGCCCACGTTCTTGTGTATGAGACTCCTTCAGCTTCTGGTCGATACATATGTGCCGAAAGTTCGCTGCATCGTGGTGATCTCGTTGAAATTTTGGCCAAGTTTTTCCCAGAGTACCCAATTCCCACCAAATGTTCAGATGAAAAGAACCCGAGAGTGAAACCGTACATCTTTTCAAATCAAAAGCTGAAAGATTTGGGAATGGAATTCACCCCAGTGAAGCAGAGTCTATATGACACTGTTAAAAATCTGCAAGACAATGGCCACCTTCCTGTGCCTCCAAAGCAAGAAGACGCCTATTGA 999 0.4675 MPTDTSSVSGQTVCVTGAGGYIASWLVKLLLEKGYTVRGTLRNPDDPKNGHLKKLEGAKERLTLHRVDLLDIDSIKAAFHGCHGVFHTASPVTDNPEEMVEPAVKGTKNVIIGAAEAKVRRVVFTSSIGTVYMNPNTSRDVLVDESFWSDLEYCKNTKNWYCYGKTVAEQSAWDIAKERGVDLVVVNPVVVIGPLLQPTINASTIHILKYLTGSAKTYVNATQSYVHVKDVALAHVLVYETPSASGRYICAESSLHRGDLVEILAKFFPEYPIPTKCSDEKNPRVKPYIFSNQKLKDLGMEFTPVKQSLYDTVKNLQDNGHLPVPPKQEDAY* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00675 332 FunFam Cinnamoyl-CoA reductase 1 4 332 - -
Lapu10g00675 332 CDD FR_SDR_e 13 299 - -
Lapu10g00675 332 Pfam NAD dependent epimerase/dehydratase family 13 244 IPR001509 -
Lapu10g00675 332 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 316 IPR036291 -
Lapu10g00675 332 Gene3D - 10 332 - -
Lapu10g00675 332 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 12 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00675 Lapu-Chr10 8775075 8777979 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00675 8 276 Monolignol Biosynthesis Gene Families AT1G80820 73.606 4.27e-142 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00675 K09753 - gmx:100811528 628.632