Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00663 ATGGCCAGACCCCAACAACGCTATCGTGGAGTCCGCCAAAGGCACTGGGGCTCTTGGGTCTCTGAAATTCGCCACCCTTTATTGAAGACTAGAATTTGGCTTGGAACCTTTGAAACGGCTGAAGATGCAGCAAGAGCATATGATGAAGCAGCTAGGCTCATGTGTGGGCCAAAAGCACGCACCAATTTCCCATACAACCCCAATGAACCACACTCATCCTCATCCAAGCTTCTCTCAGCCACTTTAACGGCTAAGTTACACAAGTGTCACATGGCCTCGCTTTCTCTTCAAATGGCCAAGCAAAAACCACCTCAAAACAAAGAGCCTCAACCCTCACAAGGGTCCAATCCATTTGCCTCTGCCAACGTCATTGCTGGATCAAGCGCTGACACTGCTTTTAGATGGCCAGATAACAGACACGAGGAGTTAAGGTGGCTTGAAGGGAATTGGGTTGGCGTGGCAGGTCAAGTTGAAGTTTCCCATCAACAATTTCAGCCAGTTCTTGAAGATGATCACATTGAGCAGATGATTCAGGAGTTGCTTGATTATGGTTCACTTGAGCTTTGCTCTGTTGGCTCAACCTAG 585 0.4821 MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFPYNPNEPHSSSSKLLSATLTAKLHKCHMASLSLQMAKQKPPQNKEPQPSQGSNPFASANVIAGSSADTAFRWPDNRHEELRWLEGNWVGVAGQVEVSHQQFQPVLEDDHIEQMIQELLDYGSLELCSVGST* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00663 194 Gene3D AP2/ERF domain 6 65 IPR036955 GO:0003700|GO:0006355
Lapu10g00663 194 MobiDBLite consensus disorder prediction 98 121 - -
Lapu10g00663 194 Pfam AP2 domain 7 56 IPR001471 GO:0003700|GO:0006355
Lapu10g00663 194 CDD AP2 6 66 IPR001471 GO:0003700|GO:0006355
Lapu10g00663 194 ProSiteProfiles AP2/ERF domain profile. 7 64 IPR001471 GO:0003700|GO:0006355
Lapu10g00663 194 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 6 119 - -
Lapu10g00663 194 PRINTS Ethylene responsive element binding protein signature 8 19 IPR001471 GO:0003700|GO:0006355
Lapu10g00663 194 PRINTS Ethylene responsive element binding protein signature 30 46 IPR001471 GO:0003700|GO:0006355
Lapu10g00663 194 SMART rav1_2 7 70 IPR001471 GO:0003700|GO:0006355
Lapu10g00663 194 FunFam Ethylene-responsive transcription factor 2 6 65 - -
Lapu10g00663 194 SUPERFAMILY DNA-binding domain 7 66 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00663 Lapu-Chr10 8684027 8684815 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00663 1 191 AP2-EREBP Transcription Factor Family AT5G25190 61.780 7.39e-75 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lapu10g00663 AP2 8.4e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00663 - - gmx:100777851 363.999