Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00662 ATGACTGCGTTGCAGGAGCGAATTCCTTTGGACCAAGTCTTCGAACAATTGAACTGTTCGAAGGAGGGTCTGACAAATGAGGAAGGCCGAAAGAGGTTGGAACTTTTTGGACCCAATAAGTTAGAAGAAAAGAAGGAAAGTAAGTTGCTGAAATTCTTGGGATTTATGTGGAATCCTCTGTCATGGGTCATGGAAGCTGCTGCTATCATGGCAATTGCACTGGCAAATGGAGGGGGCAAACCCCCAGATTGGCAGGATTTTATAGGAATACTGGCATTGCTTATTATCAACTCCACCATTAGTTTTATAGAAGAAAATAATGCAGGCAATGCTGCTGCAGCACTTATGGCAGGTCTTGCTCCCAAAACCAAGGTTCTAAGAGATGGAAAGTGGAGTGAGGAAGAGGCTGCTATATTGGTACCCGGAGACATCATCAGCATCAAGTTAGGAGACATAGTGCCAGCTGATGCCCGTCTCTTAGATGGAGATCCTCTCAAGATCGATCAATCTGCATTGACTGGTGAATCATTGCCTGTTTCAAAAAATCCAGGTGATGAAGTCTTCTCCGGGTCTACTGTTAAGCAAGGAGAGCTTGAGGCTGTTGTAATTGCTACTGGAGTACATACCTTTTTCGGTAAAGCTGCTCACTTGGTGGACAGCACCAACCAAGAAGGTCATTTTCAGAAGGTGTTGACAGCCATTGGTAACTTTTGCATTTGTTCAATAGCTGTTGGTATGGTTATAGAAATTATTGTCATGTATCCAATTCAGCACCGACCTTACAGGAATGGAATTGACAATCTATTGGTCCTTCTCATTGGAGGCATTCCTATTGCCATGCCAACTGTCTTGTCAGTAACTATGGCTATTGGTTCCCATAGACTCTCCCAACAAGGTGCCATTACTAAGAGAATGACAGCCATTGAGGAAATGGCTGGAATGGATGTTTTATGCAGTGATAAGACTGGCACTTTAACGCTGAACAAACTCACTGTAGACAAGAATTTAATTGAGGTTTTTGGAAAAAATGCTGACAAAGATACTGTAATTTTACTTGGAGCTCGAGCTTCTAGGGTTGAGAATCAAGATGCTATTGATGCTTGCATTGTTGGAATGTTGGGTGACCCAAGAGAGGCAAGAGATGGTATCAGAGAGATCCATTTCTTACCCTTCAATCCAGTAGACAAGCGTACTGCCATAACATATATAGATGACAAGGGAAATTGGCATCGAGCAAGCAAAGGCGCACCAGAGCAGATTATAGATCTCTGTCATCTTCGGGAAGATGTGAAGAAAAAAGTTCATGCCATTATTGGAAAATTTGCAGACAGAGGTCTCCGTTCCCTTGCTGTTGCCAAACAAGAAGTTCCAGAGAAAACCAAGGATAGTACAGGAGGACCGTGGCAGTTTGTGGGTCTCTTGCCTTTGTTTGACCCACCTAGACACGATAGTGCAGAGACAATTCGACGTGCACTTCATCTTGGGGTGAACGTTAAGATGATTACAGGCGATCAACTAGCTATCGGGAAGGAGACTGCTCGGAGACTTGGCATGGGAAGTAACATGTACCCATCTTCCTCCCTCCTCGGCGATCACAAGGATGAATCTATTGCTGCACTGCCAGTCGAAGAGCTTATTGAACAGGCCGATGGATTTGCTGGTGTTTTCCCTGAGCACAAATACGAGATTGTGAAAATACTTCAAGATAGAAAACACATATGTGGAATGACAGGAGATGGTGTTAATGATGCTCCTGCCCTCAAAAGGGCAGATATTGGAATTGCAGTAGCTGATGCAACAGATGCAGCTAGAGGTGCATCCGACATAGTACTAACAGAGCCTGGTCTCAGTGTGATTGTGAGTGCAGTTTTGACCAGTAGAGCCATTTTTCAGAGAATGAAGAACTACACCATTTATGCAGTTTCAATTACTATAAGGATTGTGTTGGGCTTTTTACTGATCGCACTTATATGGGAATTTGATTTCTCACCTTTCATGGTTTTAATTATTGCAATACTAAATGACGGAACAATTATGACCATCTCGAAGGACAGGGTAAAGCCATCCCCTCTCCCTGATTCATGGAAGTTGAATGAGATTTTTGCCACAGGCATAGTTCTTGGTACTTACCTCGCTATCATGACAGTTGTCTTCTTTTGGGCTGCTCATGCTTCAGATTTCTTCACTGAAAAATTTGGTGTTAGATCTATCAGATCTAACCCGGATGAGCTTACTGCGGCTATTTACCTTCAAGTAAGTATTGTAAGTCAGGCTCTTATATTTGTTACTCGATCAAGGAGTTGGTCCTACGTTGAGCGCCCTGGTTTATTGCTAGTCACGGCATTTATAGTGGCACAACTGATTGCGACAATTATTGCTGTTTATGCAAATTGGGGGTTTGCAAGGATGCAAGGGATTGGATGGGGCTGGGCTGGTGTCATTTGGCTCTATAGTATCATCTTCTACATCCCATTGGATGTTTTGAAATTCGGGATTCGATATTTCTTGAGTGGCAAGGCATGGAATAATCTTACCGAAAATAAGACTGCATTCACAACAAAGAAGGACTATGGAAAGGAAGAGCGAGAAGCACAGTGGGCTACTGCTCAACGCACATTACATGGGTTGAATCCTCCTGAAACCGAAGCCTTATTTTCAGAAAGAAATAACTACCGCGACTTATCTGAAATTGCAGAACAGGCAAAAAAACGAGCTGAAGTTGCAAGATTGCGGGAGCTTCACACATTGAAGGGACATGTGGAGTCAGTTGTGAAATTAAAAGGACTGGACATCGATACTATTCAACAGCACTACACTGTTTGA 2823 0.4315 MTALQERIPLDQVFEQLNCSKEGLTNEEGRKRLELFGPNKLEEKKESKLLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFIGILALLIINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWSEEEAAILVPGDIISIKLGDIVPADARLLDGDPLKIDQSALTGESLPVSKNPGDEVFSGSTVKQGELEAVVIATGVHTFFGKAAHLVDSTNQEGHFQKVLTAIGNFCICSIAVGMVIEIIVMYPIQHRPYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFGKNADKDTVILLGARASRVENQDAIDACIVGMLGDPREARDGIREIHFLPFNPVDKRTAITYIDDKGNWHRASKGAPEQIIDLCHLREDVKKKVHAIIGKFADRGLRSLAVAKQEVPEKTKDSTGGPWQFVGLLPLFDPPRHDSAETIRRALHLGVNVKMITGDQLAIGKETARRLGMGSNMYPSSSLLGDHKDESIAALPVEELIEQADGFAGVFPEHKYEIVKILQDRKHICGMTGDGVNDAPALKRADIGIAVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLIALIWEFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLNEIFATGIVLGTYLAIMTVVFFWAAHASDFFTEKFGVRSIRSNPDELTAAIYLQVSIVSQALIFVTRSRSWSYVERPGLLLVTAFIVAQLIATIIAVYANWGFARMQGIGWGWAGVIWLYSIIFYIPLDVLKFGIRYFLSGKAWNNLTENKTAFTTKKDYGKEEREAQWATAQRTLHGLNPPETEALFSERNNYRDLSEIAEQAKKRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV* 941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00662 940 FunFam Plasma membrane ATPase 330 477 - -
Lapu10g00662 940 PANTHER CALCIUM-TRANSPORTING ATPASE 8 872 - -
Lapu10g00662 940 Pfam E1-E2 ATPase 120 297 - -
Lapu10g00662 940 Coils Coil 891 911 - -
Lapu10g00662 940 SUPERFAMILY HAD-like 314 624 IPR036412 -
Lapu10g00662 940 SMART Cation_ATPase_N_a_2 4 76 IPR004014 -
Lapu10g00662 940 FunFam Plasma membrane ATPase 121 205 - -
Lapu10g00662 940 SFLD Haloacid Dehalogenase 300 629 - -
Lapu10g00662 940 Gene3D - 83 804 - -
Lapu10g00662 940 Gene3D - 121 205 - -
Lapu10g00662 940 Pfam haloacid dehalogenase-like hydrolase 314 591 - -
Lapu10g00662 940 Gene3D - 889 940 - -
Lapu10g00662 940 NCBIfam HAD-IC family P-type ATPase 90 338 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lapu10g00662 940 NCBIfam HAD-IC family P-type ATPase 551 664 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lapu10g00662 940 FunFam Plasma membrane ATPase 470 625 - -
Lapu10g00662 940 PRINTS P-type cation-transporting ATPase superfamily signature 168 182 - -
Lapu10g00662 940 PRINTS P-type cation-transporting ATPase superfamily signature 600 612 - -
Lapu10g00662 940 PRINTS P-type cation-transporting ATPase superfamily signature 472 483 - -
Lapu10g00662 940 PRINTS P-type cation-transporting ATPase superfamily signature 318 332 - -
Lapu10g00662 940 PRINTS P-type cation-transporting ATPase superfamily signature 494 504 - -
Lapu10g00662 940 PRINTS P-type cation-transporting ATPase superfamily signature 577 596 - -
Lapu10g00662 940 CDD P-type_ATPase_H 23 830 IPR006534 GO:0008553|GO:0016020|GO:0120029
Lapu10g00662 940 Gene3D - 315 614 IPR023214 -
Lapu10g00662 940 NCBIfam plasma-membrane proton-efflux P-type ATPase 23 795 IPR006534 GO:0008553|GO:0016020|GO:0120029
Lapu10g00662 940 SUPERFAMILY Calcium ATPase, transmembrane domain M 7 837 IPR023298 -
Lapu10g00662 940 Pfam Cation transporter/ATPase, N-terminus 8 70 IPR004014 -
Lapu10g00662 940 ProSitePatterns E1-E2 ATPases phosphorylation site. 320 326 IPR018303 -
Lapu10g00662 940 PRINTS H+-transporting ATPase (proton pump) signature 434 452 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lapu10g00662 940 PRINTS H+-transporting ATPase (proton pump) signature 749 770 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lapu10g00662 940 PRINTS H+-transporting ATPase (proton pump) signature 608 633 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lapu10g00662 940 PRINTS H+-transporting ATPase (proton pump) signature 549 565 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lapu10g00662 940 PRINTS H+-transporting ATPase (proton pump) signature 577 593 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lapu10g00662 940 FunFam ATPase 4 plasma membrane-type 565 804 - -
Lapu10g00662 940 SFLD p-type atpase 300 629 IPR044492 -
Lapu10g00662 940 SUPERFAMILY Calcium ATPase, transduction domain A 121 218 IPR008250 -
Lapu10g00662 940 Gene3D - 330 477 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00662 Lapu-Chr10 8669212 8673585 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00662 6 940 Primary Pumps ATPases AT3G42640 83.209 0.0 1598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00662 K01535 - gmx:100796279 1692.55