Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00660 ATGGCAGCAACAAAGGTGTGCGTAACTGGTGCTGGAGGATTCGTAGCGTCTTGGCTTGTCAAGCTTCTTCTCTCCAAAGGCTACACTGTCCATGGAACTGTGAGACAACCTGGTAGTGAGAAATATGAACACTTGCTGAAACTGGAGGGGGCTTCTGAAAACCTCACTCTCTTCAAGGCAGATCTCTTGAATTACGACTCTATTCTCTCGGCAATTGTTGGCTGCCCCGCAGTTTTCCATGTTGCCAGCCCTGTACCCTCAACAGTTGCTGCCAACCCTCAGGTAGAGGTGATTGAACCTGCTGTGCAAGGAACAGCTAATGTACTTAAAGCTTGTCTTGAAGCTAAAGTACAACGAGTTGTCTTTGTGTCATCGGTAGCTGCTATTTGCATGGGCCCGAATATGCCTAAGGATAAATTGATCGATGAATCCTATTGGTCTGATAAAGATTACTGCAGAAAAACTCAGAACTGGTACTGTTATTCAAAGACAGAGGCAGAGGAGCAGGCCCTGGACTTTGCAAAAAGAACTGGACTTGATGTGGTAAGCATTTGCCCTTCCCTTGTGCTTGGGCCAATTTTACAGTCAACAACTGTCAATGCAAGTAGCTTGGTTCTCCCCAAACTTTTGAAAGGTGGTAGTGACTCATTTGACAATAAGACCCGTTGGATAGTCGATGTACGTGATCTAGTTGAGGCAATACTTTTGGTGTATGAGAAGCATGAGACAAAACGGAGATACATATGCAATGCACATACCATGAAGACACGAGATTTGACAGAAAAACTAAAGAGTATATTTCCCAGCTACAAGTACCCTTCGAACTTCACTGAGGTGGATGATTACTTAAAGTTCAGCTCAGAGAAACTGGAAAGGTTGGGTTGGAAATACAGGTCGCTGGAGGAAACACTCATTGATTCTGTTGAGAGCTATCGAGAGGCTGGCCTCCTGCAATCCGAATAA 963 0.4486 MAATKVCVTGAGGFVASWLVKLLLSKGYTVHGTVRQPGSEKYEHLLKLEGASENLTLFKADLLNYDSILSAIVGCPAVFHVASPVPSTVAANPQVEVIEPAVQGTANVLKACLEAKVQRVVFVSSVAAICMGPNMPKDKLIDESYWSDKDYCRKTQNWYCYSKTEAEEQALDFAKRTGLDVVSICPSLVLGPILQSTTVNASSLVLPKLLKGGSDSFDNKTRWIVDVRDLVEAILLVYEKHETKRRYICNAHTMKTRDLTEKLKSIFPSYKYPSNFTEVDDYLKFSSEKLERLGWKYRSLEETLIDSVESYREAGLLQSE* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00660 320 CDD FR_SDR_e 6 295 - -
Lapu10g00660 320 Gene3D - 1 320 - -
Lapu10g00660 320 FunFam NAD(P)-binding Rossmann-fold superfamily protein 1 318 - -
Lapu10g00660 320 Pfam NAD dependent epimerase/dehydratase family 6 245 IPR001509 -
Lapu10g00660 320 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 5 308 - -
Lapu10g00660 320 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 313 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00660 Lapu-Chr10 8647844 8652719 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00660 5 317 Monolignol Biosynthesis Gene Families AT2G33590 63.259 4.72e-140 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00660 - - gmx:100784817 513.457