Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00657 ATGCATCAGCCAGCTTTCTCTTCTGAGAGCGAAACTCCCTCTCCCAAAGTTCAAAGCAAATCAATCTACGGTGGTAGCGGTTACGCAGCCCTCACCAATAGCAACCTTGTGATGAAGAGCAACAGCTCCAGCTTCCTCTTGTCATCGCAACATGCACCCGAGAAACCTGCTACAGCCACTTCTCCAACCGCATACATTTTATCTTTCGATGACTCCACTGTGGTTGCGGCTACCTGCCAAACCTACGATGGAAAACAGCCGTACCAAGAGGAAGTCGTTGTAGGGAATGGTGGCACCTGTCTTCCCTCAACAGGGGTTTCAGAAAAACATGACATTGAACCTAAGGCCAACCCAACAACAAGAAAAGCTAGAAGTTCTGCAGAGACACTGGACCATATAATGACTGAGAGAAAAAGGAGACGGGAACTGACAGAGAGATTCATTGCACTTTCAGCCACCATACCTGGTTTGAAGAAGATTGACAAGGCCACTATACTTAGCGAAGCAATCACTTATGTGAACCGACTTAAAGAACGCGTAAGAGAGCTAGAAGAACAACGTAAGAGGACAAGGGTAGAGTCAGTTTCATTCGTTCATCAGAGATCCAACATTGCTAGTGACGAAGGCACAACCTCTGGTGCAATGAAATCTGATGACTGCTATAGAACCACTGAAGCACTCCCTACAGTGGAAGCAAGAGTGTTTAAAAGAGATGTACTCATCCGGATTCACTGCAAGATAGAAAATGGCATTTTGATCAAAATTTTGGACCATCTTAACACTCTTGATCTCTCCACAACCAGCAACAGTGTAATGCCATTTGGAAGTTCAACTCTTGACATCAGCATTGTTGCTCAGATGGGTGACAAATTCAACGCAACAATGAATGATCTAGTGAAAAACCTGAGACTGGTTCTCTTGCAGTCATCTGAAGTTCAACAATGA 945 0.4476 MHQPAFSSESETPSPKVQSKSIYGGSGYAALTNSNLVMKSNSSSFLLSSQHAPEKPATATSPTAYILSFDDSTVVAATCQTYDGKQPYQEEVVVGNGGTCLPSTGVSEKHDIEPKANPTTRKARSSAETLDHIMTERKRRRELTERFIALSATIPGLKKIDKATILSEAITYVNRLKERVRELEEQRKRTRVESVSFVHQRSNIASDEGTTSGAMKSDDCYRTTEALPTVEARVFKRDVLIRIHCKIENGILIKILDHLNTLDLSTTSNSVMPFGSSTLDISIVAQMGDKFNATMNDLVKNLRLVLLQSSEVQQ* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00657 314 MobiDBLite consensus disorder prediction 104 128 - -
Lapu10g00657 314 SMART finulus 133 182 IPR011598 GO:0046983
Lapu10g00657 314 PANTHER BHLH TRANSCRIPTION FACTOR 5 308 - -
Lapu10g00657 314 Pfam Helix-loop-helix DNA-binding domain 132 176 IPR011598 GO:0046983
Lapu10g00657 314 Gene3D - 126 197 IPR036638 GO:0046983
Lapu10g00657 314 Coils Coil 166 193 - -
Lapu10g00657 314 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 131 200 IPR036638 GO:0046983
Lapu10g00657 314 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 127 176 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00657 Lapu-Chr10 8616353 8618607 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00657 115 306 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 43.229 8.97e-43 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lapu10g00657 HLH 1.1e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00657 - - gmx:100777846 470.314