Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00656 ATGGAGGAGGACTCATGGCTTCTTCATATGGAAATGGATTGCCCCAACGATTTCTTCCACAACTCTGAGCCTATCAACGATGACTACGACGATTTCCTCGCCGACATCATCCTCCACCACACACCGCCAACGCCCTTCTCTTCCGAAACCGAAAGCGACCACTCCTTTCGCGCTTCCCCCACCCTCCAAGACACTTCCTTCCTCCCCAACGCCGCTGACGCCGCCGTTTTCTCACCCAAACGCCCTCGTCGCATCTCCTCTCCCAGGACTTACATTCTCTCCTTCGATAACTCAACTGTCGTGCCCGCCACACCCGAACCCTCCCTCCCTTCTTCCCCTTTACCTGCCAAACGGCCCCCCCACTCTCAAGACCCCATAGCCATGCCCAATCAAGGATCCAAGAGAACCCGAACCTCTTCTCAGACCATCGATCACATAATGGCCGAGCGAAGAAGAAGGCAGGAACTCACCGAGAGGTTCATAGCACTCTCAGCCACCATTCCCGGCTTGAACAAGACGGACAAGGCTTCTGTACTTCGAGCAGCGATCGATTATGTGAAACACCTTCAAGAAAAGGTACAGGAGCTAGAGAAACAAAACAAAATGAGTGTAGCAGAGACAGTAATATTGGTGAATAAAACCGACCCAAATGGAAATGAAGACACCACCAACTCCACTGAAACGAACTGTAGCATGCTTCCGGAGATGGAAGCAAGAGTGTTGGGGAAGGAGGTGCTCATTGAGATCCACTGTGAGAAAGAATATGGCGTTGAGCTAAAAATATTGGACCACCTTGAAAATCTTCATCTCTGTGTCACCGGAAGCAGTGTCTTGCCATTTGGGAATTCCGCTCTCTGCATTACCATCACAGCTCAGATGGGTGAGGCCTACCAGATGACAGTGAATGATCTTGTGAAAAACCTTAGACAAGTCCTCTCAAAGTCTCGTTTTCTAAGCGACAGTGATCCGTACTAG 975 0.5046 MEEDSWLLHMEMDCPNDFFHNSEPINDDYDDFLADIILHHTPPTPFSSETESDHSFRASPTLQDTSFLPNAADAAVFSPKRPRRISSPRTYILSFDNSTVVPATPEPSLPSSPLPAKRPPHSQDPIAMPNQGSKRTRTSSQTIDHIMAERRRRQELTERFIALSATIPGLNKTDKASVLRAAIDYVKHLQEKVQELEKQNKMSVAETVILVNKTDPNGNEDTTNSTETNCSMLPEMEARVLGKEVLIEIHCEKEYGVELKILDHLENLHLCVTGSSVLPFGNSALCITITAQMGEAYQMTVNDLVKNLRQVLSKSRFLSDSDPY* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00656 324 Coils Coil 179 206 - -
Lapu10g00656 324 MobiDBLite consensus disorder prediction 126 140 - -
Lapu10g00656 324 MobiDBLite consensus disorder prediction 43 64 - -
Lapu10g00656 324 Gene3D - 138 208 IPR036638 GO:0046983
Lapu10g00656 324 MobiDBLite consensus disorder prediction 102 140 - -
Lapu10g00656 324 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 140 189 IPR011598 GO:0046983
Lapu10g00656 324 PANTHER BHLH TRANSCRIPTION FACTOR 36 314 - -
Lapu10g00656 324 MobiDBLite consensus disorder prediction 106 122 - -
Lapu10g00656 324 SMART finulus 146 195 IPR011598 GO:0046983
Lapu10g00656 324 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 139 210 IPR036638 GO:0046983
Lapu10g00656 324 Pfam Helix-loop-helix DNA-binding domain 145 190 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00656 Lapu-Chr10 8605013 8607263 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00656 108 313 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 44.651 6.45e-46 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lapu10g00656 HLH 3.2e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00656 - - vun:114166804 468.003