Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00655 ATGCTCACGTCACTTCCTCACATGATGGAGGAATCATGGCAAAGCTGGCTCTCTCATTTGGGAATGAATGACAACTTTGGCAGCACCAACGGTGTACCCTTTGAAGAGATGTTATGGTTGAACAATGGGCAGGGTTGTGATAGCTCCAATAATGAGGTAGCATGTATGGGGCTAAAAGAGGAACATTCAGAGTGTAGTTGGCGTAGTGGGGGGAAGCATGAGGAGTTGGAGGGAAAGGGAAGTGAGAAGAGAGGAACGAAAAGAGCAAGAACCTCTTCTGAGATAGAATATCACATCATCTCAGAGAGAAAAAGGAGACAGGATATAACAGAGAAATTCATAGCACTCTCAGCTACTATACCTGGCTTGAAGAAGATAGACAAGGCCTCTATACTTGGGGAAGCCATAAAGTACATGCGACAACTTCAACAACGCATAGCGGTGTTGGAAAAAGCCACCAATAACAACAGTGCAAAGTCGTTGATCATCGCCAAATCACACTTTTGTTCTGCATCATGTGAAGCAAACTCTAGCATTGAAGGGCTCCCAAAAGTTGAAGCAAGTGGGTTAGAGAATGAAGTGCTCATCAGAATCTATTGTGAGAAACGACAAGACATCATGCTAAACCTAATGACCCTTCTGAAAGGTGTTCATCTCTCAGTAACCAGTAGCAGCGTATTGCCATTTGGAAACTCTCTTCTCAACATCGTCGTTGTTGCTCAGATGAGTGAGGAGTACAACCTGACGGTAGCTGATTTGGTTAAGAAGTTGAAGCAGAATCTTTTCTAG 789 0.4385 MLTSLPHMMEESWQSWLSHLGMNDNFGSTNGVPFEEMLWLNNGQGCDSSNNEVACMGLKEEHSECSWRSGGKHEELEGKGSEKRGTKRARTSSEIEYHIISERKRRQDITEKFIALSATIPGLKKIDKASILGEAIKYMRQLQQRIAVLEKATNNNSAKSLIIAKSHFCSASCEANSSIEGLPKVEASGLENEVLIRIYCEKRQDIMLNLMTLLKGVHLSVTSSSVLPFGNSLLNIVVVAQMSEEYNLTVADLVKKLKQNLF* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00655 262 PANTHER BHLH TRANSCRIPTION FACTOR 23 261 - -
Lapu10g00655 262 Pfam Helix-loop-helix DNA-binding domain 98 143 IPR011598 GO:0046983
Lapu10g00655 262 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 93 142 IPR011598 GO:0046983
Lapu10g00655 262 SMART finulus 99 148 IPR011598 GO:0046983
Lapu10g00655 262 MobiDBLite consensus disorder prediction 67 90 - -
Lapu10g00655 262 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 96 155 IPR036638 GO:0046983
Lapu10g00655 262 Gene3D - 89 155 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00655 Lapu-Chr10 8594372 8596655 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00655 6 261 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 32.847 1.57e-41 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lapu10g00655 HLH 3.3e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00655 - - gmx:100778916 334.339