Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00637 ATGTCTGCTGCTGTGTGCGGAAGCAAGAGATCTTTCTTCGAAGAGCTTCCTCCTTCTCCGCCACTCTCCAAGAGGCTCCGTTGTTCCTCTTCGCCGATTCGCTTCCCTCCCCCCTCTCTCATCGACCAACTTCGCCCGCTCTTTCCCCACATGGACGACCTGGTTCTTGAGAGGGCTCTTCAGGAGTGTGGGAATGATATAGATGCTGCCATCAAGCGGCTGAATGAGCTTTGCTTAGGAAATGCAGACGGAAATGGAATTGCCGAAGGATCGGATATTGTCGTTAATTTGGATGCAGATAAATTGGAAGATAATGGAAATGCTTCTGTTCCTGAGGACCAGCAGCCTACTTTGAACAACCACCTTCCTGCAGATGGGGCAGAATGGATTGACTTTTTTGTTAGGGAAATGATGGTTGCTACTAGTGTTGATGATGCTAGAGCCCGCGCTGCAAGAATGCTGGAAGTTCTAGAGAAATCAATCAGTGAAAGAGCAAGGGCCGAGGCAACTGATGCACTTCAGAAGGAAAATTTGATGCTGAAAGAACAAATTGAAGCATTGATTAAGGAGAAAAATTCTTTCAAAAATGCTTTCAGAATTCAGCATGAACGATTTGCTGATTATGAGGTTAAGAACCAAGAGTTGCAGCATTTGAAGCAATTGGTGTCTCAATACCAGGAGCAGATTAGAACTCTCGAGGTGAATAACTATGCTTTGGCAATGCATTTGAAGCAGGCTCAACAGAGCAACCCCTTTAGTGGGCACTTCCCACCTGATGTCTTCTAA 786 0.4593 MSAAVCGSKRSFFEELPPSPPLSKRLRCSSSPIRFPPPSLIDQLRPLFPHMDDLVLERALQECGNDIDAAIKRLNELCLGNADGNGIAEGSDIVVNLDADKLEDNGNASVPEDQQPTLNNHLPADGAEWIDFFVREMMVATSVDDARARAARMLEVLEKSISERARAEATDALQKENLMLKEQIEALIKEKNSFKNAFRIQHERFADYEVKNQELQHLKQLVSQYQEQIRTLEVNNYALAMHLKQAQQSNPFSGHFPPDVF* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00637 261 Pfam CUE domain 39 76 IPR003892 GO:0043130
Lapu10g00637 261 CDD CUE 39 74 - -
Lapu10g00637 261 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 1 261 - -
Lapu10g00637 261 Coils Coil 170 197 - -
Lapu10g00637 261 Coils Coil 208 235 - -
Lapu10g00637 261 SUPERFAMILY UBA-like 39 81 IPR009060 GO:0005515
Lapu10g00637 261 Gene3D - 38 79 - -
Lapu10g00637 261 ProSiteProfiles CUE domain profile. 36 79 IPR003892 GO:0043130
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00637 Lapu-Chr10 8412940 8417112 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00637 - - gmx:100813137 452.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00637 10 8412940 8417112 Lapu10g00637 10 8412940 8417112 ECH
Lapu10g01081 10 12937108 12940199 Lapu10g00637 10 8412940 8417112 PCT