Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00636 ATGCAGAATCTGAGCCTCTACTCTCATCTTCATGGACATCATTCATTCGAAAGCCCTCTTGATTGGAATCGTCGGATGAATATCGCAATTGGTTCTGCTGAAGGAATTGTGTACCTTCACCACCAAGCAATACCACATATCATCCACAGGGATATTAAAGCAAGCAATGTGTTGCTGGATTCTGATTTCATGGCCAGGGTTGCTGATTTTGGGTTTGGTAAGTTGATCCCTGATGGGGCAACACACGTGACTACAAAAGTTAAGGGAACTCTTGGCTACCTTGCACCAGAATATGCTATGTTAGGTAAAGCAAATGAGAGTTGTGATGTCTACAGTTTTGGTGTTCTCCTTCTAGAACTTGCCAGTGGCAGAAGACCAACAGAAAAGCTTAGTTCCACAGTGAGGCGATCGATAATTGATTGGGCATTGCCATTGGTTTGTGAGAAGAAATTTAGTGAAATTGCTGATCCAAGACTAAATGGTAACTATGTGGAGGGAGAGCTTAAAAGAGTTGTTTTAGTTGCACTTGTGTCTGCGCAGGATCTACCTGAGAAGAGACCAACCATGCTTGATGTGGTAGAGCTACTCAAAGGAGAGTCTAAGGATAAATTTTCTCATATAGAGAACAGTGAAATGTTCAGAAGCCCTCTAGCTGAAGAAACCAATAATGGAACATCAGTGGCTGAAGACAGTTTAGACTATATCTCAGAAGAAAAAGAATTAGAACGTCCGTTGAGAGAGAATGCTGAACTATGA 756 0.418 MQNLSLYSHLHGHHSFESPLDWNRRMNIAIGSAEGIVYLHHQAIPHIIHRDIKASNVLLDSDFMARVADFGFGKLIPDGATHVTTKVKGTLGYLAPEYAMLGKANESCDVYSFGVLLLELASGRRPTEKLSSTVRRSIIDWALPLVCEKKFSEIADPRLNGNYVEGELKRVVLVALVSAQDLPEKRPTMLDVVELLKGESKDKFSHIENSEMFRSPLAEETNNGTSVAEDSLDYISEEKELERPLRENAEL* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00636 251 ProSitePatterns Serine/Threonine protein kinases active-site signature. 47 59 IPR008271 GO:0004672|GO:0006468
Lapu10g00636 251 MobiDBLite consensus disorder prediction 232 251 - -
Lapu10g00636 251 MobiDBLite consensus disorder prediction 215 230 - -
Lapu10g00636 251 Gene3D Transferase(Phosphotransferase) domain 1 1 214 - -
Lapu10g00636 251 PANTHER OS01G0750732 PROTEIN 1 209 - -
Lapu10g00636 251 ProSiteProfiles Protein kinase domain profile. 1 205 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00636 251 SMART serkin_6 1 196 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00636 251 MobiDBLite consensus disorder prediction 213 251 - -
Lapu10g00636 251 FunFam PTI1-like tyrosine-protein kinase At3g15890 1 212 - -
Lapu10g00636 251 Pfam Protein kinase domain 18 139 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00636 251 SUPERFAMILY Protein kinase-like (PK-like) 1 196 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00636 Lapu-Chr10 8408424 8411773 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00636 1 192 Trihelix Transcription Factor Family AT1G68690 48.469 2.17e-56 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Lapu10g00636 Pkinase 2.8e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00636 - - gmx:100791193 441.039