Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00580 ATGGGTGTGAACTGCAACAGAGTTGAGGACTCAGCATGCGACAACAATGGTTGCAGCATGAAGATCCAAAGTGAGATACAAATGCCAATGCCAGTACCAGCCTTGGAAATTCACAAGGTTCAGTTGCCACCAGAACGCACCACCTTGCAGAAACTGAGACACAGACTCTCTGAGATCTTCTTCCCAGATGACCCTCTCCACAGGTTCAAGAACCAAACTTGCTTCATGAAAATCCTCCTTGCTCTGCAATATCTGTTCCCCATTTTCCAGTGGGCCCCTCTCTACAAGCTTTCCCTTCTCCGCGCTGACATGATCTCCGGTCTCACCATTGCAAGCCTCGCCATTCCTCAGGGAATCAGCTATGCCAAGCTAGCGAACTTGCCACCCATTCTTGGATTATATTCCAGCTTTGTGCCCCCGTTGATATATTCCCTGCTTGGGAGTTCTAGACATCTTGGTGTTGGTCCAGTTTCAATTGCATCTTTGGTCATGGGATCAATGTTAAGTGAGACGGTTTCTTATATTCAAGATCCTATTCTCTATCTCAAAATGGCTTTCACTGCCACTTTTTTTGCCGGTTTGTTCCAATCTTCTCTGGGTATATTAAGGCTAGGCTTTGTAATTGATTTTCTCTCAAAGGCAACGCTGGTAGGTTTCATGGCCGGTGCTGCGATTATTGTGTCACTGCAGCAGCTGAAAGGGTTGCTTGGAATAGTTCATTTTACCAACAAGATGCAAATAACACCTGTACTCATCTCTGTTTTCAAGCAAAGAGACGAGTGGTCATGGCAAAACCTTCTGCTGGGATTCAGTTTCCTACTATTCCTGTTGACAACAAGGCACATTAGCTTGAAGAAGCCAAAATTATTCTGGGTTTCAGCAGCTGCCCCGTTGACATCAGTCATTCTGTCAACCATTTTAGTATTTTTTCTGAGAAATAAGGCTCATAAAATTGCTATTATCGGTGAATTGCCAAAAGGACTTAATCCACCATCATCAAACATGTTATACTTCAATGGTCCTTATTTGGCTCTTGCTCTCAAAACAGGACTTGTCACTGGGATTTTGTCTCTCACTGAAGGAATTGCAGTGGGAAGAACATTTGCTGCACTGAAGAACTACCAGGTGGATGGAAACAAAGAAATGATGGCCATTGGTCTTATGAATATAGCTGGCTCTTGCTCTTCATGCTACGTCACAACAGGGTCATTTTCTCGATCAGCTGTTAACTTCAATGCTGGGGCACAGACAGCAGTATCAAATATAATCATGGCATCAGCAGTTCTTGTGACCCTTTTGTTTCTGATGCCGCTGTTCTATTACACACCGAATGTAGTCTTAGCAGCCATTATCATCACTGCTGTTGTAGGGCTAATAGATTATCAAGCTGCATATAAATTGTGGAAGGTTGACAAGCTTGATTTCTTGGCCTGCTTGTGCTCCTTTTTCGGTGTTCTGTTCATTTCAGTGCCTCTAGGCCTTGGAATAGCGGTGGGAATATCAGTCTTCAAGATCTTGCTTCATGTCTCTAGGCCAAACACACTGGTTTTGGGGAATATACCGGGGACGCCAATATTCCACAACCTAAACCAATATAGAGAAGCTTTGCGGATTCCTTCATTTATCATTTTGGCCGTTGAGTCTCCCATCTACTTTGCTAATTCAACCTACCTGCAAGAAAGGATACTGAGATGGGTTCGAGAAGAGGAAGAACGAGTAAAAGCAAACAATGAAAGCACATTGAAGTGTATAATTATGGACATGACGGCTGTTACAGCCATAGACACGAGCGGAATCGATACTCTGTGTGAACTTAGAAAAGTGCTGGACAAAAGATCACTTCAGCTTGTGTTGGCAAATCCTGTTGGAAATGTAATGGAAAAGTTGCATCAGTCAAATATTTTGGATTCCTTTGGGTTGAAAGGTGTCTATCTCACAGTTGGAGAAGCTGTGGCTGACATTTCATCCTCCTGGAAAGCTCAGCCTTGA 1989 0.4354 MGVNCNRVEDSACDNNGCSMKIQSEIQMPMPVPALEIHKVQLPPERTTLQKLRHRLSEIFFPDDPLHRFKNQTCFMKILLALQYLFPIFQWAPLYKLSLLRADMISGLTIASLAIPQGISYAKLANLPPILGLYSSFVPPLIYSLLGSSRHLGVGPVSIASLVMGSMLSETVSYIQDPILYLKMAFTATFFAGLFQSSLGILRLGFVIDFLSKATLVGFMAGAAIIVSLQQLKGLLGIVHFTNKMQITPVLISVFKQRDEWSWQNLLLGFSFLLFLLTTRHISLKKPKLFWVSAAAPLTSVILSTILVFFLRNKAHKIAIIGELPKGLNPPSSNMLYFNGPYLALALKTGLVTGILSLTEGIAVGRTFAALKNYQVDGNKEMMAIGLMNIAGSCSSCYVTTGSFSRSAVNFNAGAQTAVSNIIMASAVLVTLLFLMPLFYYTPNVVLAAIIITAVVGLIDYQAAYKLWKVDKLDFLACLCSFFGVLFISVPLGLGIAVGISVFKILLHVSRPNTLVLGNIPGTPIFHNLNQYREALRIPSFIILAVESPIYFANSTYLQERILRWVREEEERVKANNESTLKCIIMDMTAVTAIDTSGIDTLCELRKVLDKRSLQLVLANPVGNVMEKLHQSNILDSFGLKGVYLTVGEAVADISSSWKAQP* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00580 662 ProSiteProfiles STAS domain profile. 531 654 IPR002645 -
Lapu10g00580 662 Pfam Sulfate permease family 100 479 IPR011547 GO:0016020
Lapu10g00580 662 ProSitePatterns SLC26A transporters signature. 129 150 IPR018045 GO:0008271|GO:0008272
Lapu10g00580 662 Gene3D STAS domain 511 656 IPR036513 -
Lapu10g00580 662 SUPERFAMILY SpoIIaa-like 536 653 IPR036513 -
Lapu10g00580 662 Pfam STAS domain 532 650 IPR002645 -
Lapu10g00580 662 NCBIfam sulfate permease 87 650 IPR001902 GO:0016020|GO:0055085
Lapu10g00580 662 CDD STAS_SulP_like_sulfate_transporter 532 647 - -
Lapu10g00580 662 PANTHER SULFATE TRANSPORTER 51 654 IPR001902 GO:0016020|GO:0055085
Lapu10g00580 662 FunFam Sulfate transporter 31 511 657 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00580 Lapu-Chr10 8010157 8014697 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00580 1 662 Inorganic Solute Cotransporters AT3G15990 73.645 0.0 1022
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00580 K17471 - gmx:100817604 1194.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00580 10 8010157 8014697 Lapu10g00580 10 8010157 8014697 ECH
Lapu5g00138 5 1168031 1172889 Lapu10g00580 10 8010157 8014697 PCT