Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00578 ATGAGTGTGGTGGGTTTTGATTTCGGTAACGAGAGTTGCATTGTTGCAGTTGCGAGGCAAAGAGGGATTGACGTTGTGCTTAATGACGAGTCCACACGGGAAACGCCTGCTATTGTGTGCTTTGGTGATAAGCAACGTTTCATTGGCACTGCTGGTGCGGCTACCGCTATGATGAACCCTAAGAATTCAATATCACAGTTTAAGAGACTCATTGGTAGAAAATTCTCTGATCCCGAATTGCAACGGGATCTTAAGACATTGTCATATCTTGTTACCGAGGGGAATGATGGGTACCCGTTGATTCACGTGCAATACTTGGGTGAGGCTAAGAAATTTACACCGACACAAGTGTTTGGTATGATGTTGTCGAATCTTAAGGAAATTGCAGAGAAGAATCTCACTACGACTGTTGTTGATTGTTGCATTGGAATTCCGGTTTATTTTACTGATTTGCAGAGGAGGGCGGTGTTGGATGCGGCCACGATTGCTGGTCTGCACCCGCTTCAATTGATCCATGAAACGACTGCCACTGCCTTGGCCTATGGGATTTATAAAACGGACCTTCCAGAAAACGATCAACTGAATGTCGCTTTTGTTGATGTTGGGCATGCTAGCATGCAAGTGTGCATTACTGGATTCAAGAAGGGGCAGTTGAAAGTGTTGGCTCATTCGTATGATAGGTCTTTAGGTGGTAAGGATTTTGACGAGGTTTTGTTCCATCACTTTGCTTCTAAGTTCAAGGAGGAGTATAAGATTGATGTTTTCCAGAATGCTAGGGCTTGCATAAGGTTGAGGGCTGCCTGTGAGAAGATGAAGAAAATGCTTAGTGCAAATACTGAGGCACCTCTCAACATTGAGTGTTTGATGGACGAGAAGGATGTTCGGGGCTTCATGAAGCGAGATGAGTTTGAGCAGCTAAGTCTTCCAATTTTAGAACGTGTGAGGGGACCTTTGGAGAAGGCAGTTACTGAAGCAGGTCTTACCGTTGGAAATGTACATATGGTTGAGCTGGTCGGTTCAGGTTCTCGTGTACCTGCCATAAACAAAATATTGACAGAGTTTTTCAAGAAAGAGCCTAGGCGAACAATGAATGCTAGTGAGTGTGTTGCTAAGGGTTGTGCGTTGGAATGTGCAATTCTTAGTCCCACGTTTAAAGTACGAGAATTTCAGGTCAATGAAAGCCTTCCTTTCTCGATTTCCCTTGCATGGAAAGGTACTGGTCCAGATGCACAGGGAAATGGACCAGAAAATCAGCACAGTTCCCTTGTTTTTCCCAAGGGTAATCCCATACCAAGTATCAAAGCTCTAACATTCTACAGGTCAGGAACATTTTCTATTGATGTACATTATGGCGATGTAAGTGAGCTGCAGACACCTGCCAAGATTAGCACATATACTATTGGTCCATTCCAAACTGAAAATAGTGAAAGGACAAAAGTGAAAGTGAAAGTTCGTTTGAATATTCATGGAATTGTATCTCTCGAGTCTGCAATGCTCCTGGAAGAAAAAGAAGTTGAGGTTCCGATTACCAAAGAAGCAGCAGGAGAAAATACTAAGCCAAACATTAACGAAGCCCCAATCGAGGCTGCTACACCTCCAGCCTCCAATGACACTGGTACAAATATGCAAGATGCAAAGGTTAGTACTGATGCTTCGGGGGCCGAAAATGGTGTTCCTGAGAATGGAGATAAGCCTTTGCAAACAAATACTGATACCAAGTCTCCAAAGAAAAAGGTTAAAAAAACAAGCATCGCAGTATCAGAGTTAGTTTATGGAGCAATGGTCTCTTTGGATGTCCAAAAGGCAATAGAAAAGGAGTTTGAAATGGCTTTGCAAGATCGTGTGATGGAGGAAACGAAGGACAAGAAAAATGCAGTTGAGGCTTATGTTTATGACATGAGAAACAAGCTTAATGACAAATACCAAGAGTTTGTCATTGCTTCAGAGAGAGAAGATTTCACTGCCAAACTTCAGGAAGTGGAAGATTGGCTTTATGACGAGGGTGACGATGAAGCTAAAGGTGTATATATTGCTAAGCTTGAAGAACTAAAAAAGCAAGGTGATCCTATTGAAGGGCGTTACAAAGAATACACGGAGAGGGGTAGTATAATTGAGCAATTCATATATTGTATAAATAGTTATAGAGAAGCTGCAATGTCGAAGGACCCCAAATTTGATCACATTGACATTAATGAGAAACAGAAGGTCATAAATGAATGTGTTGAAGCTGAGAAATGGTTTAGGGAGAAGCAACAACAACAAAACTCACTTCCAAAATATGTCAACCCTGTACTATTGTCAGCTGAAATAAGAAAGAAAGCTGAGATTGTTGATAGGTTCTGCAAGCCAATTATGACAAGACCAAAGCCAACCAAACCAACTACTTCACCTGGATCAGGAGCCCCATCTCCGCAGGGTGATGAGCAGCAACACCCTCATGGGGATGTTAATGCCAACAATAACGAAAATACTGGGGATAGAAGTAGCCAGGCTGCACCAGCGTCTACTGAACCAATGGAGACTGATAAGTCTGAAAACGAAGGCTCTACATAA 2553 0.4254 MSVVGFDFGNESCIVAVARQRGIDVVLNDESTRETPAIVCFGDKQRFIGTAGAATAMMNPKNSISQFKRLIGRKFSDPELQRDLKTLSYLVTEGNDGYPLIHVQYLGEAKKFTPTQVFGMMLSNLKEIAEKNLTTTVVDCCIGIPVYFTDLQRRAVLDAATIAGLHPLQLIHETTATALAYGIYKTDLPENDQLNVAFVDVGHASMQVCITGFKKGQLKVLAHSYDRSLGGKDFDEVLFHHFASKFKEEYKIDVFQNARACIRLRAACEKMKKMLSANTEAPLNIECLMDEKDVRGFMKRDEFEQLSLPILERVRGPLEKAVTEAGLTVGNVHMVELVGSGSRVPAINKILTEFFKKEPRRTMNASECVAKGCALECAILSPTFKVREFQVNESLPFSISLAWKGTGPDAQGNGPENQHSSLVFPKGNPIPSIKALTFYRSGTFSIDVHYGDVSELQTPAKISTYTIGPFQTENSERTKVKVKVRLNIHGIVSLESAMLLEEKEVEVPITKEAAGENTKPNINEAPIEAATPPASNDTGTNMQDAKVSTDASGAENGVPENGDKPLQTNTDTKSPKKKVKKTSIAVSELVYGAMVSLDVQKAIEKEFEMALQDRVMEETKDKKNAVEAYVYDMRNKLNDKYQEFVIASEREDFTAKLQEVEDWLYDEGDDEAKGVYIAKLEELKKQGDPIEGRYKEYTERGSIIEQFIYCINSYREAAMSKDPKFDHIDINEKQKVINECVEAEKWFREKQQQQNSLPKYVNPVLLSAEIRKKAEIVDRFCKPIMTRPKPTKPTTSPGSGAPSPQGDEQQHPHGDVNANNNENTGDRSSQAAPASTEPMETDKSENEGST* 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00578 850 MobiDBLite consensus disorder prediction 533 550 - -
Lapu10g00578 850 FunFam Heat shock 70 kDa protein 4 594 704 - -
Lapu10g00578 850 FunFam Heat shock 70 kDa protein 4 1 72 - -
Lapu10g00578 850 PANTHER HSC70CB, ISOFORM G-RELATED 1 842 - -
Lapu10g00578 850 MobiDBLite consensus disorder prediction 789 839 - -
Lapu10g00578 850 Gene3D - 38 113 - -
Lapu10g00578 850 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 387 591 IPR029047 -
Lapu10g00578 850 FunFam Heat shock 70 kDa protein 4 108 205 - -
Lapu10g00578 850 Gene3D - 596 706 IPR029048 -
Lapu10g00578 850 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Lapu10g00578 850 PRINTS 70kDa heat shock protein signature 140 160 - -
Lapu10g00578 850 PRINTS 70kDa heat shock protein signature 332 348 - -
Lapu10g00578 850 PRINTS 70kDa heat shock protein signature 30 42 - -
Lapu10g00578 850 PRINTS 70kDa heat shock protein signature 363 383 - -
Lapu10g00578 850 PRINTS 70kDa heat shock protein signature 2 15 - -
Lapu10g00578 850 FunFam Heat shock 70 kDa protein 4 230 313 - -
Lapu10g00578 850 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 598 693 IPR029048 -
Lapu10g00578 850 Gene3D - 186 360 - -
Lapu10g00578 850 MobiDBLite consensus disorder prediction 513 578 - -
Lapu10g00578 850 MobiDBLite consensus disorder prediction 781 850 - -
Lapu10g00578 850 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 716 792 IPR029048 -
Lapu10g00578 850 Gene3D - 5 374 - -
Lapu10g00578 850 FunFam Heat shock 70 kDa protein 4 38 113 - -
Lapu10g00578 850 SUPERFAMILY Actin-like ATPase domain 195 380 IPR043129 -
Lapu10g00578 850 CDD HSPA4_like_NDB 2 381 - -
Lapu10g00578 850 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 627 IPR029047 -
Lapu10g00578 850 Gene3D Actin; Chain A, domain 4 230 313 - -
Lapu10g00578 850 Pfam Hsp70 protein 3 694 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00578 Lapu-Chr10 7996064 8000592 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00578 4 405 Calmodulin-binding Proteins AT1G16030 36.543 1.69e-83 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00578 K09489 - gmx:100816539 1435.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00578 10 7996064 8000592 Lapu10g00578 10 7996064 8000592 ECH
Lapu5g00142 5 1191560 1197323 Lapu10g00578 10 7996064 8000592 PCT