Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00572 ATGAACAGACAGGGGCAGAGATCCGGTGCGACGGGGGTGCACCATAACCGCCAGCACTCCGAACATTATCTCGATGCTTCTTCCAAGTGGTTTAACTCCTCCTCCAATCACATTCCTCCTCTTCAGGACTACAATTTGTACGGTGGCGGAGGCAGAATGTACCGGAACAACGTGCAGAGGAGCTTCAATGAATATTGTATGGATCCGTTAACGCCTCCTCGTAGTTATACCGTTAAGAAAAACAGCAACGGAATCGCTAACGGCGACGAGGACGATTCTCCTCGCGATTTCAGCCCTGGCCTCTTGGATCTTCATTCGTTCGATACAGAGCTTCTTCCTCAGATTCCATCCTCGAACGCGTATGATTCCGAGCCTTACATTTTCGGCAAACAAACTGGCAGAGCTCGTGCTACTGATAACAACGTCTCCAATAGTCTTGCTGCCACAGAGAATCTGAAATCTGGCAATGTAGCTAAGATTAAAGTCGTGGTTCGCAAGAGACCGCTTAATAAGAAGGAGACGGCTAAGCATGAGGAGGATATTATAGATACAGTTTCAAATTCTTTAACCGTGCACGAGACCAAACTTAAGGTTGATCTAACTCAGTATGTTGAGAAGCATGAATTTGTTTTTGACGCTGTTTTGAATGAAGAGGTTACAAATGATGAGGTGTATCGTGAAACAGTGGAGCCCATAGTTCCAATAATATTTCAACGCACTAAGGCAACTTGCTTTGCATATGGTCAAACAGGAAGTGGAAAAACTTACACAATGAAGCCACTGCCTATTAAAGCATCAAGGGACATCTTGAGATTGATGCATCATACCTACAGGAGTCAAGGATTTCAGTTGTTTGTGAGTTTCTTTGAAATATATGGTGGGAAGCTTTTTGATCTCCTTAATGATCGAAAAAAACTGTGCATGAGGGAGGATGGTAAGCAACAAGTTTGCATTGTTGGTTTGCAAGAGTACCAAGTATCGGATGTAGAGACCATCAAGGAACTGATTGAGCAAGGAAACGCCACAAGAAGTACTGGCACCACTGGTGCAAATGAGGAGTCTTCACGATCACATGCAATTCTTCAGCTTGCTATTAAGAGATCAGTTGATGGAAATGCATCCAAGCCTCCTCGTGTTGTTGGGAAGCTCTCCTTCATAGATCTTGCTGGAAGTGAACGTGGAGCAGATACCACAGATAATGACAAACAGACAAGAATAGAAGGTGCTGAGATCAATAAGAGCTTGCTCGCCTTAAAGGAATGCATAAGAGCTCTAGATAATGACCAAGGACACATCCCGTTCAGAGGCAGTAAATTGACTGAAGTTCTGAGGGATTCATTTGTTGGTGATTCCCGCACTGTTATGATATCATGCATATCACCAAGTTCCGGTTCATGTGAACATACTCTGAATACATTAAGATATGCTGACAGGGTAAAAAGCTTATCCAAAGGGAACAATTCTAAGAAGGACGTTTTATCTTCAAATTTCAACCTTAAAGAGTCAATTACTATTCCCTTGTCTTCTGTTAATACATATGCCTATGAGGATCGCGCAACTGATACATGGCCTGAAGAAAAAGATGGGGATGAATTTAGTCCTCCCGAAGATTACTATGAACAGGTGAAACCATCATGGAAGAAAAATGGAAAGATAGAGCCATATGGTGCAACAGATGACAAATTTAAGAAACCCCCCAATGGCCAGATTAAATGGAAGGACATCTCAAAAGTTGAATCTAAAACAGTACAGTCAGATGATGATTTGAATGCCCTCTTACAGGAAGAAGAAGACCTTGTAAATGCTCACCGGAAACAAGTAGAGGAGACCATGAATATTGTTAGAGAGGAAATGAACCTGTTGGTTGAAGCAGACAAACCAGGTAATCAGCTGGATGATTATATAGCAAAACTAAATGTCATTCTGTCTCAGAAGGCAGCTGGCATCATGCAGTTACAAACCCGTTTAGCTCATTTCCAGAAACGTTTAAAGGAGCATAGCGTTTTGGCTTCATCTGCTGGTTACTAA 2028 0.4246 MNRQGQRSGATGVHHNRQHSEHYLDASSKWFNSSSNHIPPLQDYNLYGGGGRMYRNNVQRSFNEYCMDPLTPPRSYTVKKNSNGIANGDEDDSPRDFSPGLLDLHSFDTELLPQIPSSNAYDSEPYIFGKQTGRARATDNNVSNSLAATENLKSGNVAKIKVVVRKRPLNKKETAKHEEDIIDTVSNSLTVHETKLKVDLTQYVEKHEFVFDAVLNEEVTNDEVYRETVEPIVPIIFQRTKATCFAYGQTGSGKTYTMKPLPIKASRDILRLMHHTYRSQGFQLFVSFFEIYGGKLFDLLNDRKKLCMREDGKQQVCIVGLQEYQVSDVETIKELIEQGNATRSTGTTGANEESSRSHAILQLAIKRSVDGNASKPPRVVGKLSFIDLAGSERGADTTDNDKQTRIEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGDSRTVMISCISPSSGSCEHTLNTLRYADRVKSLSKGNNSKKDVLSSNFNLKESITIPLSSVNTYAYEDRATDTWPEEKDGDEFSPPEDYYEQVKPSWKKNGKIEPYGATDDKFKKPPNGQIKWKDISKVESKTVQSDDDLNALLQEEEDLVNAHRKQVEETMNIVREEMNLLVEADKPGNQLDDYIAKLNVILSQKAAGIMQLQTRLAHFQKRLKEHSVLASSAGY* 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00572 675 ProSitePatterns Kinesin motor domain signature. 381 392 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lapu10g00572 675 PANTHER KINESIN-RELATED PROTEIN 6 534 670 IPR027640 GO:0003777|GO:0007018
Lapu10g00572 675 SMART kinesin_4 157 488 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu10g00572 675 MobiDBLite consensus disorder prediction 77 100 - -
Lapu10g00572 675 Gene3D Kinesin motor domain 135 485 IPR036961 -
Lapu10g00572 675 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 482 IPR027417 -
Lapu10g00572 675 MobiDBLite consensus disorder prediction 1 21 - -
Lapu10g00572 675 FunFam Kinesin-like protein 138 485 - -
Lapu10g00572 675 PRINTS Kinesin heavy chain signature 348 365 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu10g00572 675 PRINTS Kinesin heavy chain signature 239 260 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu10g00572 675 PRINTS Kinesin heavy chain signature 382 400 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu10g00572 675 PRINTS Kinesin heavy chain signature 432 453 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu10g00572 675 ProSiteProfiles Kinesin motor domain profile. 159 482 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu10g00572 675 Pfam Kinesin motor domain 165 481 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu10g00572 675 Coils Coil 593 624 - -
Lapu10g00572 675 CDD KISc_KIF2_like 159 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00572 Lapu-Chr10 7948373 7954054 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00572 158 482 Calmodulin-binding Proteins AT5G65930 33.731 3.49e-45 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00572 K10393 - gmx:100802651 1252.27