Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00551 ATGATGGCTGGGAACCCTAACTGGTGGACGCATCCACCATCCTTGATCCCTCCCCAGTATGTGCTTGGATCTTCTTCAATACCTTTTAATTCTTCCACACAGAACCCAGAGCCCCCTCAGTCACTGAGCCAACTTCTTTTCACTGGTTTACCAGGAGAGGAAGAGAGAGTAGCATTCAGTCATTTTCAATCAAAAAAGTTGGATGAATGGAATGAACATATGCTTAATCCATCCCCCATAAATCCTATGGTTGATGTAATAAAGCAAGAGGTTTCCCAAAGTGGTAACTTCTATCACCAGGGACATGATCAGGAATTTCAGGTTTCTGGAGCACCTTGGTCACATATGGTGCCAGTTTCTTCTTCCCCTAGGTCTAGTGTTGCTAGCTTCAGTAGTAATAATTTATTGGATTTCACTTATAACAAAGAAGATCATAGGAAGAACCAACTACCAGATCACACATCCGAGTGTAATGGCACAGCCACTGCCGGAGTTCATAAGAAGACTAAGAGTCAGCCATCTTCAAGCCAACCACCTCTCAAGGTGAGAAAGGAGAAGCTAGGCGATAGAATAACAGCCCTTCACCAGCTAGTTTCCCCATTCGGAAAGACTGACACAGCTTCTGTCTTGTTAGAAGCCATTGGATACATAAGATTCCTTCAGGGTCAAATTGAGGCACTGAGTTCTCCTTACTTGGGCAATGGATCAAAAAACATGAGGAATCCACAGTCTCAACAGGTACATGGAGAAAGAAATTCTGTATTTCCTGAGGACCCCGGTCAGCTGTTGAATGACAATGGCCTGAAAAGAAAGGGAGCTCCAAACCAGGATGCAAAAGATAAGCCAAAGGACTTGAGGAGTAGAGGGTTGTGCTTGGTTCCAGTGTCTTGTACCCAACATGTTGGAAATGAAAATGGAGCTGATTACTGGGCACCAGCATATGGCAGTGGATTTTAA 957 0.442 MMAGNPNWWTHPPSLIPPQYVLGSSSIPFNSSTQNPEPPQSLSQLLFTGLPGEEERVAFSHFQSKKLDEWNEHMLNPSPINPMVDVIKQEVSQSGNFYHQGHDQEFQVSGAPWSHMVPVSSSPRSSVASFSSNNLLDFTYNKEDHRKNQLPDHTSECNGTATAGVHKKTKSQPSSSQPPLKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQGQIEALSSPYLGNGSKNMRNPQSQQVHGERNSVFPEDPGQLLNDNGLKRKGAPNQDAKDKPKDLRSRGLCLVPVSCTQHVGNENGADYWAPAYGSGF* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00551 318 MobiDBLite consensus disorder prediction 235 285 - -
Lapu10g00551 318 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 181 232 IPR036638 GO:0046983
Lapu10g00551 318 MobiDBLite consensus disorder prediction 146 181 - -
Lapu10g00551 318 Gene3D - 181 239 IPR036638 GO:0046983
Lapu10g00551 318 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 47 300 - -
Lapu10g00551 318 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 171 220 IPR011598 GO:0046983
Lapu10g00551 318 MobiDBLite consensus disorder prediction 235 251 - -
Lapu10g00551 318 FunFam Transcription factor bHLH123 family 181 244 - -
Lapu10g00551 318 MobiDBLite consensus disorder prediction 153 179 - -
Lapu10g00551 318 CDD bHLH_AtbHLH_like 181 228 IPR045239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00551 Lapu-Chr10 7809072 7812421 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00551 135 262 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 60.000 2.67e-39 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00551 - - gmx:100802121 598.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00551 10 7809072 7812421 Lapu10g00551 10 7809072 7812421 ECH