Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00535 ATGCCGGTGTTGCGTAACGGAGCGAGCAGGGGCCGGGGAGCAGCGAAGCAACAGCAGCGGCGGCAGAGTCCAGCGGAAGGGGAGGCGATTGCGACGAGGACTCGGCGGCGGCGTGCGGCGGCGGCGGCGGCAGCAGTGCCGAAGAGTAACAACAACAACGAAAATAATAAGCACAAGCAGCAACAACAGCACCAGCCGGAGCAGGTGGTGGTGGTAAATGAGAACGTAGTTGTTGCGGCGAAAGAAGAAGAGAATCGGGGTTTGGGGGAAGGTGTTGGTGCGGGTGGAGCGGAGAGGGAAGAGGTAGGGGAGAAAGAGATGGTTGGATGTGACAGTGGAGGTCGGAGCAATGATAAGGCAAATGCCGCTGGTGAAGATGACGCCAATACTCCTGAGGTTCCTCAGAAGATTCAAGTAGGTAATTCTCCTTGTTATAAAGTAGAAAGAAAACTTGGCAAGGGTGGATTTGGTCAGGTATATGTTGGACGACGTTGTGGTGGAAATTTGAATGAGAGAACTGGACCTGGAGCTGTAGAGGTTGCATTAAAACTTGAGCACAGAACTAGTAAAGGATGTACCTATGGACCACCCTACGAGTGGCAAGTGTACAACACTCTCGGTGGCAGTCACGGTGTGCCACAAGTACATTACAAGGGCAGGCAGGGCGACTATTATGTCATGGTTATGGATATACTGGGACCTAGCCTGTGGGATGTTTGGAATAATAATAACTCTCATGCCATGTCCACTGAAATGGTTGCTTGTATTGCCATTGAAGCAATATCTATATTGGAAAAAATGCACTCTCGAGGATATGTGCACGGGGATGTTAAGCCTGAAAATTTTCTGCTTGGTCCTCCTGGGACGCCTGATGAGAAAAAGTTGTTCCTTGTAGATCTTGGATTAGCTACTAAGTGGAGGGATAGTACAACAGGCTCACACGTGGAATATGATCAAAGGCCAGATGTTTTTAGAGGCACAGTCCGCTATGCTAGTGTGCATGCACATTTAGGGAGAACTGCAAGCAGGAGGGATGACTTGGAATCTCTAGCATATACATTGATTTTTCTTCTCCGAGGCCGCCTTCCCTGGCAAGGATTCCAGGGAGAGAACAAAGGATTTCTGGTTTGCAAGAAGAAGATGGGAACATCTCCAGAGATTATTTGTTGCTTTTGTCCCCAACCTTTTAAGCAGTTTGTTGAACATGTTGTGAACCTAAAGTTTGACGAAGAACCCAATTATGCAAAATACATTTCTCTATTTGATGGGATTGTTGGTCCTAACCCAGAGATTAGACCAATTAATACAGAAGGTGCACAAAAGCTCATTGGTCACAAGAGAGGCCGATTAGTGATGGAAGAAGAGGACGATGACCAGCCAAAAAAGAAGACCCGTATTGGTTTGCCAGCATCTCAGTGGATAAGTGTTTACAATGCTCGTAGACCAATGAAACAAAGATACCACTACAATGTGTCAGATGCAAGGTTATCCCAGCACATTGAGAAAGGAAATGAAGATGGCTTATATATTAGCAGTGTTGCTTCATGTCAGAACGTATGGGCATTAATCATGGATGCAGGGACAGGTTTCGCTGGACAAGTTTACGAACTCTCTCCCTTCTTTCTCCATAAGGAATGGATCGTGGAACAATGGGAACTAGGTTACTACATCAGCGCAATTGCTGGAGCTGCAAATGGTAGCTCGCTAGTAGTAATGTCCAAGGGCACACAGTATGTGCAGCAATCATACAAAGTCAGTGATTCATTTCCTTTCAAGTGGATTAACAAAAAGTGGAGGGAGGGATTTTACGTGACTTCAATGGCCACCTCAGGGACGAGATGGGGAGTCGTCATGTCTCGTGGTGCAGGATATTCAGACCAGGTGATTGAACTAGACTTTCTGTATCCAAGTGAGGGGATTCACAAGCGGTGGGATAGCGGTTACAGAATCACATCCACTGCTGCAACTTGGGACCAAGCTGCTTTTGTCCTGAGTGTGCCAAGGAGGAAGCCTTTAGATGAAACTCAGGAAACACTTAGGACTTCTGCTTTTCCCAGTACACATGTCAAGGAGAAGTGGGCTAAGAACCTCTACATTGCTTCTATTTGCTACGGACGTACAGTTTCTTGA 2130 0.47 MPVLRNGASRGRGAAKQQQRRQSPAEGEAIATRTRRRRAAAAAAAVPKSNNNNENNKHKQQQQHQPEQVVVVNENVVVAAKEEENRGLGEGVGAGGAEREEVGEKEMVGCDSGGRSNDKANAAGEDDANTPEVPQKIQVGNSPCYKVERKLGKGGFGQVYVGRRCGGNLNERTGPGAVEVALKLEHRTSKGCTYGPPYEWQVYNTLGGSHGVPQVHYKGRQGDYYVMVMDILGPSLWDVWNNNNSHAMSTEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGSHVEYDQRPDVFRGTVRYASVHAHLGRTASRRDDLESLAYTLIFLLRGRLPWQGFQGENKGFLVCKKKMGTSPEIICCFCPQPFKQFVEHVVNLKFDEEPNYAKYISLFDGIVGPNPEIRPINTEGAQKLIGHKRGRLVMEEEDDDQPKKKTRIGLPASQWISVYNARRPMKQRYHYNVSDARLSQHIEKGNEDGLYISSVASCQNVWALIMDAGTGFAGQVYELSPFFLHKEWIVEQWELGYYISAIAGAANGSSLVVMSKGTQYVQQSYKVSDSFPFKWINKKWREGFYVTSMATSGTRWGVVMSRGAGYSDQVIELDFLYPSEGIHKRWDSGYRITSTAATWDQAAFVLSVPRRKPLDETQETLRTSAFPSTHVKEKWAKNLYIASICYGRTVS* 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00535 709 MobiDBLite consensus disorder prediction 46 70 - -
Lapu10g00535 709 SMART serkin_6 145 443 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00535 709 ProSitePatterns Protein kinases ATP-binding region signature. 151 183 IPR017441 GO:0005524
Lapu10g00535 709 MobiDBLite consensus disorder prediction 1 137 - -
Lapu10g00535 709 ProSitePatterns Serine/Threonine protein kinases active-site signature. 272 284 IPR008271 GO:0004672|GO:0006468
Lapu10g00535 709 CDD STKc_CK1 145 421 - -
Lapu10g00535 709 Gene3D Transferase(Phosphotransferase) domain 1 110 465 - -
Lapu10g00535 709 Pfam Protein kinase domain 145 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00535 709 PANTHER CASEIN KINASE-RELATED 145 677 - -
Lapu10g00535 709 MobiDBLite consensus disorder prediction 97 112 - -
Lapu10g00535 709 FunFam casein kinase 1-like protein HD16 117 465 - -
Lapu10g00535 709 ProSiteProfiles Protein kinase domain profile. 145 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00535 709 SUPERFAMILY Protein kinase-like (PK-like) 144 426 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00535 Lapu-Chr10 7670198 7676239 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00535 99 370 AGC Kinase Gene Family AT3G08720 21.818 3.45e-09 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Lapu10g00535 Pkinase 7.7e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00535 - - gmx:100799630 1207.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00535 10 7670198 7676239 Lapu10g00535 10 7670198 7676239 ECH