Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00524 ATGGGAAAAGCTAGCAGGTGGTTCAAGGGTTTGTTGGGGATGAAGAAGGAGAAGGACCACAGTGACAATTCAGGCTCACTGGCTCCTGACAAGAAGGAGAAGAAAAGGTGGAGTTTTGCTAAGCCAGGGAAGGATGTGCCATCTTCAGTTCCTGCCACAGATAACACCTGGCTCAGATCCTACATTGCTGATACAGAGAATGAGCAGAATAAACATGCAATTGCCGTTGCCGCCGCAACTGCCGCTGCCGCCGACGCCGCAGTGGCCGCCGCACAGGCTGCCGTAGCGGTTGTGAGGCTGACAAGCCAGGGTAGAGGTGCATTGTTCAGTGGAAGCAGGGAGAAGTGGGCTGCTGTGAAGATCCAGACTTTTTTTAGAGGCTACTTGGCACGGAAGGCTCTTAGAGCACTGAAAGGATTGGTGAAGATACAGGCTCTTGTTAGAGGGTACTTGGTTAGAAAGAGGGCTGCTGCAACTCTTCACAGTATGCAAGCTCTAATAAGAGCTCAAACTGCTGTCAGATCACAGCGAGCTCGTCGTTCCTTGAGCAAAGAAAGTAGATTTCTACCTGAAGTTCTTGCAAGAAAATCTGTGGAACGATTTGATGAAGCAAGGAGTGAATTCCACAGTAAAAGGCTACCTACATCCTATGAGACATCCTTGAATGGTTTTGATGAGAGCCCCAAGATTGTTGAAATTGACACATACAAGACGCGATCAAGGTCTAGGCGCTTCACCTCTACAATGTCTGAGTGTGGAGAAGACATGTCCTGTCAGGCAATGTCGTCCCCTCTTCCTTGTCATGTCCCTGGTCGAATCTCCGTTCCTGATTGCAGACACCTTCAAGATTTTGATTGGTACTTCAATGTTGATGAGTGTAGATTCTCCACTGCTCATAGCACCCCACGTTTCACAAACTATGCCCGTCCTAATGCTCCAGCTACACCAGCCAAGAGTGTTTGTGGAGACACCTTCTTCAGACCTTGTTCCAATTTTCCCAACTACATGGCCAATACTCAGTCATTCAAGGCAAAACTAAGGTCTCACAGTGCTCCAAAGCAAAGACCTGAACCCAAGAAAAGGCTCTCACTCAACGAAGTGATGGCAGCAAGAAACAGCATAAGTAGTGTTAGAATGCAAAGGCCATCATCCAATTTCTTCCAGACTCAAGAATCCTGGAATTTTTGA 1188 0.4773 MGKASRWFKGLLGMKKEKDHSDNSGSLAPDKKEKKRWSFAKPGKDVPSSVPATDNTWLRSYIADTENEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSQGRGALFSGSREKWAAVKIQTFFRGYLARKALRALKGLVKIQALVRGYLVRKRAAATLHSMQALIRAQTAVRSQRARRSLSKESRFLPEVLARKSVERFDEARSEFHSKRLPTSYETSLNGFDESPKIVEIDTYKTRSRSRRFTSTMSECGEDMSCQAMSSPLPCHVPGRISVPDCRHLQDFDWYFNVDECRFSTAHSTPRFTNYARPNAPATPAKSVCGDTFFRPCSNFPNYMANTQSFKAKLRSHSAPKQRPEPKKRLSLNEVMAARNSISSVRMQRPSSNFFQTQESWNF* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00524 395 Gene3D - 56 140 - -
Lapu10g00524 395 PANTHER IQ-DOMAIN 5-RELATED 1 365 - -
Lapu10g00524 395 SMART iq_5 113 135 IPR000048 GO:0005515
Lapu10g00524 395 SMART iq_5 136 157 IPR000048 GO:0005515
Lapu10g00524 395 ProSiteProfiles IQ motif profile. 114 142 IPR000048 GO:0005515
Lapu10g00524 395 Pfam Protein of unknown function (DUF4005) 302 377 IPR025064 -
Lapu10g00524 395 ProSiteProfiles IQ motif profile. 138 165 IPR000048 GO:0005515
Lapu10g00524 395 MobiDBLite consensus disorder prediction 1 51 - -
Lapu10g00524 395 Pfam IQ calmodulin-binding motif 141 155 IPR000048 GO:0005515
Lapu10g00524 395 Pfam IQ calmodulin-binding motif 116 135 IPR000048 GO:0005515
Lapu10g00524 395 MobiDBLite consensus disorder prediction 10 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00524 Lapu-Chr10 7557626 7560370 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00524 1 379 IQD Protein Family AT3G16490 56.489 3.61e-116 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00524 - - gmx:100797686 693.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00524 10 7557626 7560370 Lapu10g00524 10 7557626 7560370 ECH
Lapu5g00199 5 1633657 1635143 Lapu10g00524 10 7557626 7560370 PCT