Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00511 ATGGCGACACAGCCGGCGCCGGGAAACCAAATGCTGGAGGGAGGAGGAGCGCCGCCGCCTCCGGGGACTGATATGACCGGAATATGCTTCCGGGACCAGCTCTGGCTCAACAGCTTCCCTCTCGATCGCAACCTTGTATTCGATTACTTCGCCCTCTCCCCTTTCTACGATTGGACTTGCAACAACGAGCAACTCCGTATGCGCTCCGTTCATCCCCTCGACCTCTCTCAACTCTCGAAAATGACCGGGACGGAGTATATTCTCAGCGAAGTTATGGAGCCGCACCTGTTTGTTATTCGCAAGCAGAAGAGAGATAGCCCCGACAAAGTTACGCCTATGCTAGCATACTACGTCCTCGATGGTTCTATATACCAGGCTCCACAACTGTGCAATGTTTTTGCTGCCAGAATTGGAAGGGCCCTTTATTACATACAAAAGGCATTTACTACAGCTGCCTCAAAATTGGAGAAGATTGGATATGTTGATTCTGAAAATGAGACTGCATTGGTGGAATCAAAGACTGCCAAGGAGACAATTGACATAAAGGAAGTTAAGCGTGTGGATCATATTCTTGCATCCTTGCAACGCAAGTTACCACCAGCTCCGCCTCCACCACCATTTCCAGAAGGGTATGTGCCGCCTCCAACAGCAGAAGCTGAGAAAGGCACCGAAACTCAGGAAGCAGTAGAGACACAAGCTCCTACTGCTGATCCCATAATTGATCAAGGACCAGCAAAAAGAATGAAATTTTAA 753 0.4927 MATQPAPGNQMLEGGGAPPPPGTDMTGICFRDQLWLNSFPLDRNLVFDYFALSPFYDWTCNNEQLRMRSVHPLDLSQLSKMTGTEYILSEVMEPHLFVIRKQKRDSPDKVTPMLAYYVLDGSIYQAPQLCNVFAARIGRALYYIQKAFTTAASKLEKIGYVDSENETALVESKTAKETIDIKEVKRVDHILASLQRKLPPAPPPPPFPEGYVPPPTAEAEKGTETQEAVETQAPTADPIIDQGPAKRMKF* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00511 250 PANTHER MED-6-RELATED 10 250 IPR007018 GO:0003712|GO:0006357|GO:0016592
Lapu10g00511 250 MobiDBLite consensus disorder prediction 196 250 - -
Lapu10g00511 250 MobiDBLite consensus disorder prediction 1 23 - -
Lapu10g00511 250 PIRSF MED6_meta/plant 15 250 IPR016820 GO:0003712|GO:0006357|GO:0016592
Lapu10g00511 250 Pfam MED6 mediator sub complex component 28 153 IPR007018 GO:0003712|GO:0006357|GO:0016592
Lapu10g00511 250 MobiDBLite consensus disorder prediction 197 213 - -
Lapu10g00511 250 FunFam Mediator of RNA polymerase II transcription subunit 6 22 151 - -
Lapu10g00511 250 Gene3D Mediator complex, subunit Med6 22 151 IPR038566 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED6 Lapu10g00511 Med6 1.6e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00511 K15128 - gmx:100792248 460.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00511 10 7449261 7457066 Lapu10g00511 10 7449261 7457066 ECH