Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00508 ATGGCCAAATCCTTAGAGAGAGAGTTTTGGAATGTTAGAAGCTTCCCTGAAGGCACAAGAAACTGCCATACCTTCTATCTCCCTCGAATAAATAGCAATAAACGTCTGATTAGGGCAAGGTTCATGTATGGAAACTATGATGGAAAAAATTCCTTGCCCAAGTTTGATTTGTACCTCGGACCCAACTTTTGGGACTCTGTGGAGTTTGAAAATGCTTCCAGTGTGACAACCAAGGAAATTGTTCAAGTTGCAACATCAGATTATATTCAAATTTGCCTTGTTAACACAAATGAAGGAACACCCTTCATATCAACCTTGGAGATCAGAGTTCTAAATGATGGTACCTATGTATCTGAGTCAATACAGCTGCTGGAAAGGTTTGATGTAGGCTTACAAGAGGGTCAAATTGTGAGGTACCCGGATGATATCTATGATCGAATTTGGTCACCCTACAATCCACATGGCTGGAAACAGATTAGTACATCCCTTGCAGTAGCTAATGGAGGACCTTTCTCTTATGGGGTACCCTCCATTGTCCTTAAAACAGCAGCAACACCAGAAAATGCGAATGATAATTTGGGATTTTCCTATCAGCTAAGCAATGGTGCAGTCAGATTTTATGTATACATGTACTTTGCTGAGATAGAGAAGCTTGTAGGTAATCAAACTAGAGAATTCGATGTTTATGTGAACGGGGGGCTCCTTCAGAATAATGTCAGTTTACCTTTCCTAGGTCACGGCACTTTGTTATATTTATCATCTGAACCTGAAACCAAGATACAAATTTGGATCAACAGAACAAACGAAGCAACTATGTCCCCTATACTAAATGGCATTGAGGTTTATGAAGCGAAGGCCCTCGATCTACCAGAAACAGATCAAAATGATGTTGGTGCCATCATGCAAATAAAGTCAACGTACGGCATCAAGAAAAAATGGCAAGGAGATCCTTGTAGCCCTAAAACTGACATATGGAAGGGTGTGAACTGCAGCTACAATGGACACAACCATCCTAGAATCACATCTTTGAACCTGTCCTCTAGTGGGTTGACAGGGAACATAGCTCAGGCCATATCCAATCTGAAATTAATACAATATTTAAATATAGGAGGTAATAAACTATCAGGCTCAATTCCTTCAAAACTCTCTCAGAGAACAAGGAACGGGTCGCTGCTTATATTAAGTATTGGAGGAAATCCACATCTTTGTTTCTCAAGTACTTGTCAGAAGAGGAATAAGATAGTAATTCCGTTGGTAGTAACAGCTATTGCAGCTCTGGTCCTTTCAGCAGCACTATCGTTTATTTACAGAAGAAAACTTCAGGCGGTCATGAATATGCACAAGCCTAGTTGTTTCAACAAAACTGTGAGTGTGGACTCCAAGAAACAAGAGTTCACCTACTTAGAGGTTCAAAGTATTACCAATAATTTTGAGAGGGTTGTGGGTAAAGGAGGATTTGGAACTGTCTACCATGGTTGCATAGGTGAAGCACAAGTAGCAGTTAAGATGCTCTCTCCTTCAACTCAAGGGTATCAGCAATTTCAGACAGAGGCAAATATTCTCACAAGAGTACACCATAAATGCTTGACTCCACTTATTGGATATTGCAATGAAGGCACTAAAACAGCACTCATCTATGAATACATGACCAATGGAGACTTATCTGACAAACTATCTGGTAAAAATCAAACTTTCTTGGATTGGGAACAGAGACTTCAAATTGCACTGGATGCTGCAGTAGGCTTGGAGTACCTTCATACTGGTTGCAAGCCCCCAATTATTCACAGAGATGTTAAGACTAGAAACATTTTACTGAATGAAAATCTCCGCGCTAAAATATCTGATTTTGGATTGTCAAGGATCTTTCCAGATGAAGGTGACACCCACGTATCAACAGTTATTGCAGGCACCCCAGGATACCTTGACCCTGAATACTACATAACAAACAGGTTGAATGAAAAAAGTGACGTATTTAGTTTTGGAGTTGTTCTCCTAGAGATAATCACAGGGCGAAAAGCCATATTGAAAGGCCATGTGAAAACTCACGTAATTAAATGGGTGAGTTCCATTCTGGATGATGATGGTGAAATTGGTAGTATTATGGATCCAAGGTTACAAGGAGATTATGACAGTGAGGCTGCAAGGAAAGTGGTAGATGTAGCAATGGTTTGTGTAGCTCCAAGCTCTGCTGATAGGCCAACAATGAGTAAAGTGGTGATGGAACTAAAACTATGTTTTCCCACAGGGGAACTTAGGAGTGCCTCCAATGGATCCATTGAAATTGTGTCCATGAATGCAATCAGTGGATTTAGTTCTTTGGCAAGGTAA 2328 0.4034 MAKSLEREFWNVRSFPEGTRNCHTFYLPRINSNKRLIRARFMYGNYDGKNSLPKFDLYLGPNFWDSVEFENASSVTTKEIVQVATSDYIQICLVNTNEGTPFISTLEIRVLNDGTYVSESIQLLERFDVGLQEGQIVRYPDDIYDRIWSPYNPHGWKQISTSLAVANGGPFSYGVPSIVLKTAATPENANDNLGFSYQLSNGAVRFYVYMYFAEIEKLVGNQTREFDVYVNGGLLQNNVSLPFLGHGTLLYLSSEPETKIQIWINRTNEATMSPILNGIEVYEAKALDLPETDQNDVGAIMQIKSTYGIKKKWQGDPCSPKTDIWKGVNCSYNGHNHPRITSLNLSSSGLTGNIAQAISNLKLIQYLNIGGNKLSGSIPSKLSQRTRNGSLLILSIGGNPHLCFSSTCQKRNKIVIPLVVTAIAALVLSAALSFIYRRKLQAVMNMHKPSCFNKTVSVDSKKQEFTYLEVQSITNNFERVVGKGGFGTVYHGCIGEAQVAVKMLSPSTQGYQQFQTEANILTRVHHKCLTPLIGYCNEGTKTALIYEYMTNGDLSDKLSGKNQTFLDWEQRLQIALDAAVGLEYLHTGCKPPIIHRDVKTRNILLNENLRAKISDFGLSRIFPDEGDTHVSTVIAGTPGYLDPEYYITNRLNEKSDVFSFGVVLLEIITGRKAILKGHVKTHVIKWVSSILDDDGEIGSIMDPRLQGDYDSEAARKVVDVAMVCVAPSSADRPTMSKVVMELKLCFPTGELRSASNGSIEIVSMNAISGFSSLAR* 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00508 775 SUPERFAMILY L domain-like 304 402 - -
Lapu10g00508 775 CDD STKc_IRAK 481 743 - -
Lapu10g00508 775 Gene3D - 126 286 - -
Lapu10g00508 775 ProSiteProfiles Protein kinase domain profile. 475 744 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00508 775 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 549 754 - -
Lapu10g00508 775 Pfam Malectin-like domain 3 283 IPR024788 -
Lapu10g00508 775 ProSitePatterns Protein kinases ATP-binding region signature. 481 502 IPR017441 GO:0005524
Lapu10g00508 775 SMART serkin_6 475 746 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00508 775 Gene3D Phosphorylase Kinase; domain 1 456 548 - -
Lapu10g00508 775 ProSitePatterns Serine/Threonine protein kinases active-site signature. 593 605 IPR008271 GO:0004672|GO:0006468
Lapu10g00508 775 Gene3D Ribonuclease Inhibitor 298 411 IPR032675 -
Lapu10g00508 775 Gene3D Transferase(Phosphotransferase) domain 1 549 754 - -
Lapu10g00508 775 PANTHER OS07G0107800 PROTEIN-RELATED 10 746 - -
Lapu10g00508 775 Pfam Protein tyrosine and serine/threonine kinase 477 742 IPR001245 GO:0004672|GO:0006468
Lapu10g00508 775 SUPERFAMILY Protein kinase-like (PK-like) 458 742 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00508 Lapu-Chr10 7430867 7437505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00508 4 743 Receptor kinase-like Gene Family AT2G19210 46.341 0.0 682
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lapu10g00508 Malectin_like 1.2e-88 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00508 - - pvu:PHAVU_010G143100g 915.99