Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00494 ATGGAAAGCTGTAGTGATGCAGAAAGTAGAAAGCCATTAGCACCAAGAAAGTCAGCACCAATGAAGAAGAAACTATGTTGTAGATATTGTAAAAGAAAGTTTTCTAGTCACCAAGCCTTAGGAGGACATCAGAATGCTCACAAGACAGAAAGAGCAGCAACTCAGAGAGAGAAGATTCTTAGCATGGCTTCTCCTTGTGGCAAAGATTCATATGTTGGAGGGTTTGTTGATTCCAGCAAATGTTATGGATTTAAAGGCAAAACAATTGGACTCAAAGATGATCCATGGAAAGGGCAATACACTTGGCATTATGTTCAAAATACCATTCATAGATTGGAGAGTTTGAATGCTGAAGGAAATGAATTTCATCAGCACCAAAAACCATATCAAACTTTAATTTTTCCTATACTTACAGGTGGAGCACCAAATTCAGAGTCACAATCACAGGCATTGTTTAGTCCTAATATATGTGATAAGATTTCATTTGATGATGAGAATTTTGGTGAAGAAAATACTTTTTCTCCCATGGCTGCCAATGGAGTGGTGGAGGAGCTTGATTTAACTCTCAAGCTTTGA 576 0.3767 MESCSDAESRKPLAPRKSAPMKKKLCCRYCKRKFSSHQALGGHQNAHKTERAATQREKILSMASPCGKDSYVGGFVDSSKCYGFKGKTIGLKDDPWKGQYTWHYVQNTIHRLESLNAEGNEFHQHQKPYQTLIFPILTGGAPNSESQSQALFSPNICDKISFDDENFGEENTFSPMAANGVVEELDLTLKL* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00494 191 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 20 94 IPR044246 GO:0009788
Lapu10g00494 191 Gene3D Classic Zinc Finger 5 71 - -
Lapu10g00494 191 SUPERFAMILY beta-beta-alpha zinc fingers 23 52 IPR036236 -
Lapu10g00494 191 ProSitePatterns Zinc finger C2H2 type domain signature. 26 47 IPR013087 -
Lapu10g00494 191 ProSiteProfiles Zinc finger C2H2 type domain profile. 25 52 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00494 Lapu-Chr10 7298938 7299591 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00494 27 102 C2H2 Transcription Factor Family AT5G14010 42.500 2.37e-11 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00494 - - vun:114165662 183.341