Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00485 ATGCATGCATGGGAATCCCTTGTAAGGGAGAGAAGGAAGAACAGTACCAAGAACTTGGTGCTTTGGTCTATTGTTAGAACTCGGTTAAAAGAGAACATGTTCATAGCTTTTTACGCATTACTCAGAACCATTGCTGTGACTGTTTCTCCTTTAATACTCTATGCTTTTGTCAACTTTTCAGATAGTAGGGATACCATGGATACAGATCTCAAAGAGGGTCTTACCATAGTGGGTTTTCTTATTCTCTCCAAAGTGGTTGATTCTGTGTCCCAGAGACATTGGTTTTTTTATTCCAGGAGGTCAGGATTGAAGATGAGATCAGCTCTGATGGTGGCAGTGTATGAAAAACAACTAAAGCTTTCAAGCTCTGCAAGGACAAGACACTCAACCGGTGAAATTGTGAATTACATTGCGGTTGATGCGTATCGCATGGGAGAATTTCCATGGTGGTTTCATATAACATGGGCATGTACATTGCAACTTCTTCTATGTATCGGTATCCTTTATGGGGTTGTGGGAGTTGGTGCTCTTCCTGGTTTAGTCCCTCTTCTTATATGTGGACTTATCAATGTACCATTTGCCAAGATCCTACAAAAATGCATGGCACAGTTCATGATTTCACAGGATGAGCGTCTTAGAACAACTTCAGAAATTCTAAACAGCATGAAAATCATTAAGTTACAGTCCTGGGAAGACAAATTCAAGAGTTTGGTTGAGAACCTACGTGCTAAAGAGTTCATTTGGCTATCTAAGGCACAGATAATGAAAGCTTATGGGTCTTCAACTAATGCGGTAGAAATCCAAGATGGCAACTTCATTTGGGATCTTGAATCAGTGTCCCCAACTTTAAGAGATGTGAATTTAGAAATCAAATGGGGACAGAAAGTTGCAGTTTGTGGGCCAGTTGGAGCTGGAAAATCATCTCTCTTGTATGCAGTACTTGGAGAGATTCCCAAGATCTCAGGAACTGTTAATGCGTCTGGAAACATAGCATATGTTTCTCAAACTTCTTGGATACAAAGTGGGACGGTTCGAGATAATATACTCTTCGGCAAGCCGATGGAAAAAATAAGATACGAGAGTGCAATTAAAGTTTGTGCTTTGGATAAGGATATCAATGATTTTAGCCATGGTGATCTTACAGAAATAGGCCAGCGAGGGATTAACATGAGTGGAGGACAAAAGCAAAGGATTCAACTAGCTCGTGCTGTCTACAACGATGCTGACATTTATCTCCTCGACGACCCTTTCAGTGCAGTTGATGCTCACACTGCTGCTATCCTTTTCAAAAACTGCGTAATGACGGCTCTAAGAGAGAAAACAGTCATTCTAGTGACACATCAAGTGGAGTTTCTCTCAGAAGTTGATACAATCCTGGTAATGGAAGGTGGAAAAGTTACTCAATCAGGTAATTATGAGAATCTCTTAACAGCTGGGACAGCCTTTGAACAACTAGTGAGCGCTCATAAGCAAGCAATTACAGAGTCGGATCAAAATAATGAAAACAAAACTCACAGAGAAGAGTCTGAAGGTATTTATCTCACAAAAAATCAAAGTGAGGGGGAGATTTCTACCGAGGGTCAGCTTGGGACACAGCTTACACAAGAAGAAGAAAAAGAGATTGGTGATGTTGGCTGGAAGACAGTCTGGGATTATATTTCATTTTCCAGGGGTTCATTGATGCTGGCTTGGATCATGTTGGCACAATTTGCTTTTATTGCTTTACAGACTACATCAATGGTTTGGCTTGCTCTAGCCATTGAAATTTCAAAAATAACTAGTGCCACCTTGATTGGGGTGTATTCAATTATTTCATTTTCTGGTGCTGCGTTTATATATGTAAGGGCTCTCTTGACCTCTTACCTCGGATTAAAAGCTTCTAAATCTTTCTTTACAAGTTTCAATGCAGCTATCTTCAATGCTCCTATGCTTTTCTTTGACTCAACCCCTGTGGGGAGGATTTTAACGAGAGCTTCCTCGGATTTAAGTATTTTGGACTTTGATATACCTTCTTCGATCACCTTTGTAGCATCTGTAGCAGTTGAAATTTTGGTGACGATTTGTGTAATGGTTTTTGTAACATGGCCAGTTCTCATTGTTGCCATTCCTGCAATAGTTGCATCAAAATATTTTCAGGAATATTATCAAGCCTCGTCGAGGGAATTAATAAGGATCAATGGAACCACAAAAGCTCCTGTGATGAATTTTGCAGCTGAGACCTCACTTGGTGTGGTTACTGTAAGAGCATTCAATATGGTAGAAAGATTTTTTAAGAATTACTTAAAGCTTGTGGACACAGACGCAACACTGTTTTTTCATTCCAATGCGGCCATGGAATGGTTAGTTTTAAGGATTGAAGCACTTCAAAATTTGACAGTCATCACTTCAGCTTTGCTACTCATTCTATTTCCTCGTGGATACGTGTCTTCTGGCTTTGTGGGACTATCTCTCTCTTATTCTTTAACCTTGACAGGATCCCAAATATTTTGGACTCGATGGTATTGCAACTTATTAAACTATGTTATCTCTGTTGAAAGAATCAAGCAATTCATTCACCTACCCTCAGAGCCTCCTGCCATTGTGAGAGACCACCGCCCTCCATCTTCATGGCCTTCCAAAGGCAGGATTGACCTTCAAGCCTTAGAGATTAGATATCGTCCTAATGCACCTTTAGTACTCAAGGGTATCACTTGTACGTTTAAAGAAGGGAGTAGGGTGGGAGTTGTTGGGAGAACCGGAAGTGGAAAAAGTACACTCATAAGTGCTTTGTTTCGCTTAGTTGAGCCAGCAGGAGGAGATATTGTTATAGATGGGATTAACATATGCTCAATGGGATTGAAGGATTTGAGAATGAAACTAAGCATCATCCCTCAAGAACCAACTCTTTTCAAGGGCAGCATTAGAACCAACTTGGACCCTTTAGGCCTGTACTCAGATGATGAGATATGGGAGGCTTTAGAGAAATGTCAGCTTAAGGAAACTGTCAGCAATCTACCAAATCTCTTAGACTCTTTGGTGAGTGATGAAGGTGGAAATTGGAGCTTGGGACAACGGCAACTGTTTTGTCTCGGAAGAATACTGCTTAAGAGGAACAGAATTCTTGTTCTGGATGAAGCTACTGCCTCCATTGACTCTGCCACAGACGCAATTCTACAAAGAATTATTAGACAAGAATTTGCAGAATGCACAGTCATAACAGTGGCTCACAGGGTTCCAACTGTAATAGACAGTGACATGGTTATGGTTCTCTCCTATGATAATTTATTGCGTTTGCCTTGGAGATTTCAGTTTGGCTTCCTTTTCCTGCCAAAGGTGATAGACATTGTCAACTTGTTTTTCCTGTGTCTCTTTTATGTATCATTGCTGTCCAATCTGATCAAGAAAAGACCTGATTGTGTCAGGACTGCTTTAAGAAGGAAAACAGTTATTCTTGTGACTCATCAAGTAATGGAAGGAGGAAAAATTTGTCAATCGGGCAGGTATGAAGATTTGTTGACTGCTGGAACAGCCTTTGAACTGCTTTTGAGTGCTCATAGAGAGGCAATTACTGGAATAGAGACAAATGGTGCAGACCAAAGAGAAGTTCAAAATGAGGATTCTCATTTTTCTAATCTCACTAAATGTGGAAATGATGGGGAAACTTCTCCCGAGATTCAACTTACACAAGAAGAAGAAAAGGAGAGTGGTGATGTTGGGTGGAAGCCATTCTGTGACTACATTTTGTTCCCTAAGGGATCTTTGCTTCTATTTTTGAGCATATTAGCACAATTGGCGTTTGTAGGTTTGCAGGCTGCATCAACTTATTGGCTTGCTATAGCCAATGAGATGTCAAAAGTAACTAGCAGCATCTTAATTGGAGTTTACAGTCTGATTTCTTTTCTAAGCATTGTTTTTGTATATCTGAGATCTTACATTGCTGCACATCTTGGTTTAAAAGCTTCTAAAGCTTTCTTCTCTGCCTTCACTGATTCTATCTTTAATGCTCCTATGTTGTTCTTTGATTCAACCCCAGTAGGGAGGATTTTGACCCGAGCTTCATCAGATTTGAGTATTTTAGATTTTGATATCCCTTTTTCCACCATCTTTCTGATAGCTGAAGTAACTGAACTTCTTACAATGATTGTGATAATGGTTTCGGTCACGTGGCAAGTGCTCGTTGTTGCAGTTCTTGCCATGGTGGCTTCAAAATATGTTCAGGGCTATTATCAAGCTTCTGCAAGAGAAATTATACGAATCAATGGAACCACAAAAGCTCCTCTCATGAATTTTACGGCCGAGACATCTCTCGGTGTGGTTAGTATAAGAGCTTTCAACATGGCTGACAGATTTTTCAAAAACTACCTTAACCTTGTTGACACAGATGCCACAATGTTCTTTCATTCCAACGCTGCCATCGAATGGTTAATTCTAAGGATCGAGCTACTTCAGAATTTGACACTCTTCACTGCAGCTTTGGTGCTTGTTCTAGTTCCAAAGGGATATGTGGCCCCTGGCCTTGTGGGACTTTCTCTGTCTTACGCTTTTCCAGTGACAGGAACCGTAGTTCATATGACTCGATTCATTTGCAACTTATCAAACTATGTGATCTCTGTTGAAAGAATCAAGCAATTCATTCACATATCAGCAGAGCCTAGTGCAATTGTAGAGGACAAAAGACCACCACCTTCTTGGCCTTCTAAAGGTCGAATAGATCTCCGTTCTCTAGAGATTAGGTATCGTCCAAATTCTCCATTAGTCCTGAAGGGCATCTCTTGTACGTTTAAAGAAGGGAGTAGAGTTGGAGTTGTAGGAAGAACAGGAAGTGGAAAAACTACACTTATAAATGCTTTGTTTCGCTTAGTTGAGCCTACTAGAGGAGACATTCTCATAGATGGGATTAATATATGCTCAATTGGGTTAAAAGATTTAAGAATAAAGCTAAGCATCATTCCTCAAGAACCAACTCTTTTCAAGGGAAGCATTCGAAATAACTTGGACCCTCTAGGCCTTTACTCTGATGATGAAATATGGAAGGCTTTAGAGAAATGTCAGCTCAAGGCAACAATTAGAAGTCTACCAAATCTCTTGGACACTTCTGTGAGTGATGAAGGTGAAAACTGGAGTGTGGGGCAGCGCCAACTCATATGTCTAGGAAGAGTACTGCTTAAGAAGAACAGAATTCTTGTTCTGGATGAAGCTACTGCTTCCATTGATTCTGCCACAGATGTTATTCTACAAAGAATCATCAGACAACAATTTTCAGAATGCACAGTTATAACTGTGGCTCACAGAGTTCCAACTGTAATTGACAGTGACATGGTCATGGTCCTATCTTATGGGAAACTGGTGGAGTATGACAAGCCCTCAAAGCTCATGGATACTAACTCTTCATTCTCTAAGCAGGTAGCTGAATATTGGTCCAACTGCAACAGGAATTTTTCCCCAAAAGATGAGCATGCATCAATGTTACTGAAGAGAAGCAATATAATATCAGAGCTAGTATATTAA 5487 0.4028 MHAWESLVRERRKNSTKNLVLWSIVRTRLKENMFIAFYALLRTIAVTVSPLILYAFVNFSDSRDTMDTDLKEGLTIVGFLILSKVVDSVSQRHWFFYSRRSGLKMRSALMVAVYEKQLKLSSSARTRHSTGEIVNYIAVDAYRMGEFPWWFHITWACTLQLLLCIGILYGVVGVGALPGLVPLLICGLINVPFAKILQKCMAQFMISQDERLRTTSEILNSMKIIKLQSWEDKFKSLVENLRAKEFIWLSKAQIMKAYGSSTNAVEIQDGNFIWDLESVSPTLRDVNLEIKWGQKVAVCGPVGAGKSSLLYAVLGEIPKISGTVNASGNIAYVSQTSWIQSGTVRDNILFGKPMEKIRYESAIKVCALDKDINDFSHGDLTEIGQRGINMSGGQKQRIQLARAVYNDADIYLLDDPFSAVDAHTAAILFKNCVMTALREKTVILVTHQVEFLSEVDTILVMEGGKVTQSGNYENLLTAGTAFEQLVSAHKQAITESDQNNENKTHREESEGIYLTKNQSEGEISTEGQLGTQLTQEEEKEIGDVGWKTVWDYISFSRGSLMLAWIMLAQFAFIALQTTSMVWLALAIEISKITSATLIGVYSIISFSGAAFIYVRALLTSYLGLKASKSFFTSFNAAIFNAPMLFFDSTPVGRILTRASSDLSILDFDIPSSITFVASVAVEILVTICVMVFVTWPVLIVAIPAIVASKYFQEYYQASSRELIRINGTTKAPVMNFAAETSLGVVTVRAFNMVERFFKNYLKLVDTDATLFFHSNAAMEWLVLRIEALQNLTVITSALLLILFPRGYVSSGFVGLSLSYSLTLTGSQIFWTRWYCNLLNYVISVERIKQFIHLPSEPPAIVRDHRPPSSWPSKGRIDLQALEIRYRPNAPLVLKGITCTFKEGSRVGVVGRTGSGKSTLISALFRLVEPAGGDIVIDGINICSMGLKDLRMKLSIIPQEPTLFKGSIRTNLDPLGLYSDDEIWEALEKCQLKETVSNLPNLLDSLVSDEGGNWSLGQRQLFCLGRILLKRNRILVLDEATASIDSATDAILQRIIRQEFAECTVITVAHRVPTVIDSDMVMVLSYDNLLRLPWRFQFGFLFLPKVIDIVNLFFLCLFYVSLLSNLIKKRPDCVRTALRRKTVILVTHQVMEGGKICQSGRYEDLLTAGTAFELLLSAHREAITGIETNGADQREVQNEDSHFSNLTKCGNDGETSPEIQLTQEEEKESGDVGWKPFCDYILFPKGSLLLFLSILAQLAFVGLQAASTYWLAIANEMSKVTSSILIGVYSLISFLSIVFVYLRSYIAAHLGLKASKAFFSAFTDSIFNAPMLFFDSTPVGRILTRASSDLSILDFDIPFSTIFLIAEVTELLTMIVIMVSVTWQVLVVAVLAMVASKYVQGYYQASAREIIRINGTTKAPLMNFTAETSLGVVSIRAFNMADRFFKNYLNLVDTDATMFFHSNAAIEWLILRIELLQNLTLFTAALVLVLVPKGYVAPGLVGLSLSYAFPVTGTVVHMTRFICNLSNYVISVERIKQFIHISAEPSAIVEDKRPPPSWPSKGRIDLRSLEIRYRPNSPLVLKGISCTFKEGSRVGVVGRTGSGKTTLINALFRLVEPTRGDILIDGINICSIGLKDLRIKLSIIPQEPTLFKGSIRNNLDPLGLYSDDEIWKALEKCQLKATIRSLPNLLDTSVSDEGENWSVGQRQLICLGRVLLKKNRILVLDEATASIDSATDVILQRIIRQQFSECTVITVAHRVPTVIDSDMVMVLSYGKLVEYDKPSKLMDTNSSFSKQVAEYWSNCNRNFSPKDEHASMLLKRSNIISELVY* 1829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00485 1828 FunFam ABC transporter C family member 3 1546 1797 - -
Lapu10g00485 1828 FunFam ABC transporter C family member 10 16 264 - -
Lapu10g00485 1828 Pfam ABC transporter 1580 1728 IPR003439 GO:0005524
Lapu10g00485 1828 CDD ABC_6TM_ABCC_D2 1245 1538 IPR044726 GO:0140359
Lapu10g00485 1828 FunFam ABC transporter C family member 3 859 1092 - -
Lapu10g00485 1828 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 265 488 IPR003439 GO:0005524
Lapu10g00485 1828 CDD ABC_6TM_ABCC_D2 558 851 IPR044726 GO:0140359
Lapu10g00485 1828 Gene3D ABC transporter type 1, transmembrane domain 5 265 IPR036640 GO:0005524|GO:0016020
Lapu10g00485 1828 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 34 257 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lapu10g00485 1828 Pfam ABC transporter 283 417 IPR003439 GO:0005524
Lapu10g00485 1828 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 866 1085 IPR027417 -
Lapu10g00485 1828 SUPERFAMILY ABC transporter transmembrane region 1244 1544 IPR036640 GO:0005524|GO:0016020
Lapu10g00485 1828 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 878 1111 IPR003439 GO:0005524
Lapu10g00485 1828 Gene3D - 1546 1797 IPR027417 -
Lapu10g00485 1828 Gene3D - 859 1091 IPR027417 -
Lapu10g00485 1828 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1250 1526 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lapu10g00485 1828 SUPERFAMILY ABC transporter transmembrane region 549 858 IPR036640 GO:0005524|GO:0016020
Lapu10g00485 1828 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1553 1795 IPR027417 -
Lapu10g00485 1828 MobiDBLite consensus disorder prediction 1203 1217 - -
Lapu10g00485 1828 Gene3D ABC transporter type 1, transmembrane domain 1213 1543 IPR036640 GO:0005524|GO:0016020
Lapu10g00485 1828 Gene3D ABC transporter type 1, transmembrane domain 527 857 IPR036640 GO:0005524|GO:0016020
Lapu10g00485 1828 MobiDBLite consensus disorder prediction 1203 1226 - -
Lapu10g00485 1828 Pfam ABC transporter 893 1041 IPR003439 GO:0005524
Lapu10g00485 1828 CDD ABCC_MRP_domain1 265 465 - -
Lapu10g00485 1828 SMART AAA_5 292 465 IPR003593 GO:0016887
Lapu10g00485 1828 SMART AAA_5 902 1087 IPR003593 GO:0016887
Lapu10g00485 1828 SMART AAA_5 1589 1782 IPR003593 GO:0016887
Lapu10g00485 1828 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 563 826 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lapu10g00485 1828 FunFam Multidrug resistance protein associated1 247 508 - -
Lapu10g00485 1828 Gene3D - 277 518 IPR027417 -
Lapu10g00485 1828 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1565 1797 IPR003439 GO:0005524
Lapu10g00485 1828 CDD ABCC_MRP_domain2 1561 1781 - -
Lapu10g00485 1828 FunFam ABC transporter C family member 5 525 857 - -
Lapu10g00485 1828 ProSitePatterns ABC transporters family signature. 390 404 IPR017871 GO:0005524|GO:0016887
Lapu10g00485 1828 FunFam ABC transporter C family member 5 1212 1544 - -
Lapu10g00485 1828 SUPERFAMILY ABC transporter transmembrane region 21 246 IPR036640 GO:0005524|GO:0016020
Lapu10g00485 1828 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 1131 1795 - -
Lapu10g00485 1828 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 262 487 IPR027417 -
Lapu10g00485 1828 CDD ABCC_MRP_domain2 874 1084 - -
Lapu10g00485 1828 CDD ABC_6TM_ABCC_D1 34 261 IPR044746 GO:0140359
Lapu10g00485 1828 Pfam ABC transporter transmembrane region 35 256 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lapu10g00485 1828 Pfam ABC transporter transmembrane region 593 826 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lapu10g00485 1828 Pfam ABC transporter transmembrane region 1248 1507 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00485 Lapu-Chr10 7204868 7227160 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00485 260 521 Calmodulin-binding Proteins AT2G36910 25.795 1.72e-21 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00485 - - gmx:100784827 1436.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00485 10 7204868 7227160 Lapu10g00485 10 7204868 7227160 ECH