Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00483 ATGGCTTCAAGCTCTGGTGCAGAAGGAGCGTCACTGGATGATTACGAGTCCTTGATTGCAACAACCGATGTGGAGCTTCTGAAGCGAGCGTGGCGCAACGAAAAGGCAGCGCCCGAGATTCTCCGCTTTGAATCTCATTTGATTTCCCGCGTCAAGGAACAGATTCAACTCATGGAGGAAACCGTGGAGGAGAAATCCAGTGGCGGCAATGATCCTCTCTCAGTATCTCTGTATCAGATGGACTTGGACAGAACCCTCTTTCTGCTCAGATCCTATCTCCGCATCCGCATCCAGAAGATTGAAAAGTACATGTTCCACATCTTAAAAACCGAAGAACTTTGGAACAGACTATCTAAAGAGGAGAAAGATTTCGCCAGAACGTGTACAAGTGACCTAAACCAACATCTAGAGGAGACTGTTCTGTCGAAGCTGCCGGAAAATTATCAGTCTGTTCTAAGGCAATCTGTAACAAGTGAAGAGGACGACATGGTCCCAGAACCACAACTAGACACATTTGTTTTATGTAGAAGTAAAGAGTATCTTACGGGCATTCAACTCGAAGATGGACCTGCTGATGACAGGTCGAAACTGTTTGAGATGGAGCCCGGTGTCCTGCACTTCATATGTTACAAATCAATAAAGGCACTTGTGGAGAGTGGCAAAATAGATCTACTCTAA 678 0.4572 MASSSGAEGASLDDYESLIATTDVELLKRAWRNEKAAPEILRFESHLISRVKEQIQLMEETVEEKSSGGNDPLSVSLYQMDLDRTLFLLRSYLRIRIQKIEKYMFHILKTEELWNRLSKEEKDFARTCTSDLNQHLEETVLSKLPENYQSVLRQSVTSEEDDMVPEPQLDTFVLCRSKEYLTGIQLEDGPADDRSKLFEMEPGVLHFICYKSIKALVESGKIDLL* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00483 225 Gene3D - 10 215 - -
Lapu10g00483 225 SUPERFAMILY PriA/YqbF domain 169 225 - -
Lapu10g00483 225 FunFam DNA replication complex GINS protein SLD5 8 215 - -
Lapu10g00483 225 Pfam GINS complex protein 50 122 IPR021151 -
Lapu10g00483 225 SUPERFAMILY GINS helical bundle-like 20 153 IPR036224 -
Lapu10g00483 225 PIRSF GINS_Sld5 1 225 IPR008591 GO:0006261
Lapu10g00483 225 CDD GINS_A_Sld5 23 141 IPR038749 -
Lapu10g00483 225 Pfam DNA replication complex GINS protein SLD5 C-terminus 167 225 IPR031633 -
Lapu10g00483 225 PANTHER SLD5 PROTEIN 9 225 IPR008591 GO:0006261
Lapu10g00483 225 CDD GINS_B_Sld5 167 225 IPR031633 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00483 1 163 Core DNA Replication Machinery Family AT5G49010 66.258 2.84e-71 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00483 K10735 - gmx:100784291 381.719