Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00471 ATGGGACTGCAGCTGATTTTCCTGCTAATTGAGCTGCATTTAGTTGTCTGCACCCAGCAGGTTCATGAATATGCAGCCACCAAACTGCAGCATTCCAGCGACAAAAGCCATTTTAGTATTGCAATCCCACCATCAAAGTCATCTTCTGAAAGTCATTCAAGTATTGCAGATTCACCTTCCAAGTCATCTTCCGGGGTACCTGCAAGCATCGCACTTTCACCTTCCAAGTCAATTCACAAATCTCCTACAATCATATGGACACATGGTTCTGTGGATTCCCCAATCTCACATCATAAGCATCACTATTCTAAAAGAAAGTCCCACAATCCAACTCTAGGACCAATCTATGCAGTCCAGCCTCCTACATACAGCCATCAAGGTCCTTCAGCCTTCAAATCACGACCTCCTTTCTCTTCACCAAATATTAAGGATATTCATGCGCCGGCCCCTGCACCATCACCAGCTATTGTGCCAGGTCATCTGGATGTACCCTCTACTTCACCTAGAATTTCTCCTCTCGGTTCATCATTGCAGAAGAAAAAGACTCCACCACCAGCATATGAATTTGTTCTGCCACCTCCACCTCCTAATAAGGATTGCTTGTCGATGACATGCTCAGAGCCCTTGACATATACACCTCCTGGGTCACCTTGTGGTTGTGTATGGCCGCTTCAGGTTAAACTGCACATCAACATTGCAATATACAAGTTTTTTCCGTTGGTTGCAGAGCTAGCCAAGGAGATTGCAGCAAGTGTTTTGCTGAACCATACCCAGGTTCGCATTGTGGAAGCTGATGCTGCTAGTCAGCGAATGGAGAAAACCACTGTTCTCATAGACTTAGTACCCAAAGGAGTAAAATTTGATGATACCACCTCATTTTTAATATATAAGAAATTCTGGCGCAGGGAGATTCTGATAGATGCTTCAGTCTTTGGTACCTATGAAGTACTCTATGTTCAGTATCCAGGTCTTCCACCATCTCCACCTTCAACTCCCTCAGATGCTTCTGTTATAGATGATGAGCCAAATCCAGGACGTGGCAACAATGGAATGATGATGAAACCTTTAGGAGTAGATGTCCGAAAGAACAAAAAAGAAGGGAGTAATGGAAGAATGATTGTTATGATTGTGCTGTCATCAGTTACTGCTTTTGTTGTATTCATTGGTCTTGCTTGGCTTTGTGTGCTGAAATGTCGTGCCTATGTTCATGAACAAGAACCAGTTCCAGATGGTTTAATTTCATCCTCTTCAAAACAATCGAGGGCTGCTAGGTCATTGGCTCACGGGATAAGGTCAGGTTCTGGATCACAGTCCTTCAATTCTGGAACAATAACATATACAGGGTCTGCTAAGATCTTTACTTTGAATGACTTGGACAAAGCAACAAATAACTTTGATTCTTCGAGAATATTAGGAGAAGGTGGTTTTGGACTTGTTTACAAAGGTGTTCTAAATGATGGGAGGGATATAGCCGTGAAGGTTCTCAAAAGAGATGATCAGCGTGGTGGTCGTGAATTCTTAGCAGAAGTTGAGATGCTTAGCCGCCTACACCATCGAAATTTAGTTACATTATTTGGTATATGCATAGAGAAACAGACTCGCTGCTTAGTTTATGAGCTTGTTCCTAATGGAAGTGTGGAGTCCCATTTACATGGAGCTGACAAGGAAACTGATCCACTGGATTGGAATGCACGGATGAAGATTGCTCTTGGTGCAGCTCGGGGATTGGCCTATCTGCATGAAGATTCAAATCCATGTGTCATACATCGGGATTTCAAGGCCAGCAACATCTTGTTGGAGTATGATTTTACACCCAAGGTCTCAGATTTTGGATTAGCTAGAACAGCACTGGATGAGAGAAACAAGCACATCTCCACACATGTTATGGGAACATTTGGCTACTTAGCTCCTGAATATGCTATGACTGGCCATCTTCTGGTCAAGAGTGATGTTTACAGTTATGGAGTTGTACTCCTTGAGCTCCTAACTGGAAGAAAGCCGGTGGATTTGTCACAACCACCAGGTCAAGAAAATCTTGTGACATGGGTTCGTCCGCTTCTCACTAGTAAGGAGGGTTTGCAGATGATCATAGACCCAGTTGTAAAGCCTAACGTTTCTGTTGATATTGTGGTCAAAGTTGCAGCAATTGCATCCATGTGTGTGCAACCGGAAGTCTCGCAACGTCCTTTCATGGGAGAAGTCGTTCAGGCCTTGAAGCTGGTGTGCAGTGAGGTTGAGGGAACAAACTATTTAAGATCAATGAGTTATCAAGAAGGTATTCTAACTGATGTGGAAGGAAAGTTTTCTGAAGCTTCAGGTGAAAGAGTGGAATTTTCAGACTACCAAGGAACTCTTTCTGGCTATCAATCTGGTGAAGAAAAGTTAGAATTATCAGCATCAGAGTTGTTCAGTGCTTCAGGTCAGGAATTAGAGTCATTCAGGAGGTATTCTCGATCAGGGCCTCTGACTATTGGGAAGAAAAGGCAGTTCTGGCAGAAATTGAGAAGTTTGTCTAGAGGTAGTACCAGTGAACATGGATTTTCAACTAAACTATGGCCTGGATCCCATTAA 2571 0.4321 MGLQLIFLLIELHLVVCTQQVHEYAATKLQHSSDKSHFSIAIPPSKSSSESHSSIADSPSKSSSGVPASIALSPSKSIHKSPTIIWTHGSVDSPISHHKHHYSKRKSHNPTLGPIYAVQPPTYSHQGPSAFKSRPPFSSPNIKDIHAPAPAPSPAIVPGHLDVPSTSPRISPLGSSLQKKKTPPPAYEFVLPPPPPNKDCLSMTCSEPLTYTPPGSPCGCVWPLQVKLHINIAIYKFFPLVAELAKEIAASVLLNHTQVRIVEADAASQRMEKTTVLIDLVPKGVKFDDTTSFLIYKKFWRREILIDASVFGTYEVLYVQYPGLPPSPPSTPSDASVIDDEPNPGRGNNGMMMKPLGVDVRKNKKEGSNGRMIVMIVLSSVTAFVVFIGLAWLCVLKCRAYVHEQEPVPDGLISSSSKQSRAARSLAHGIRSGSGSQSFNSGTITYTGSAKIFTLNDLDKATNNFDSSRILGEGGFGLVYKGVLNDGRDIAVKVLKRDDQRGGREFLAEVEMLSRLHHRNLVTLFGICIEKQTRCLVYELVPNGSVESHLHGADKETDPLDWNARMKIALGAARGLAYLHEDSNPCVIHRDFKASNILLEYDFTPKVSDFGLARTALDERNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVTWVRPLLTSKEGLQMIIDPVVKPNVSVDIVVKVAAIASMCVQPEVSQRPFMGEVVQALKLVCSEVEGTNYLRSMSYQEGILTDVEGKFSEASGERVEFSDYQGTLSGYQSGEEKLELSASELFSASGQELESFRRYSRSGPLTIGKKRQFWQKLRSLSRGSTSEHGFSTKLWPGSH* 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00471 856 Gene3D Transferase(Phosphotransferase) domain 1 541 756 - -
Lapu10g00471 856 Gene3D Phosphorylase Kinase; domain 1 437 540 - -
Lapu10g00471 856 FunFam receptor-like serine/threonine-protein kinase ALE2 438 540 - -
Lapu10g00471 856 MobiDBLite consensus disorder prediction 327 355 - -
Lapu10g00471 856 SUPERFAMILY Protein kinase-like (PK-like) 444 738 IPR011009 -
Lapu10g00471 856 MobiDBLite consensus disorder prediction 90 113 - -
Lapu10g00471 856 FunFam Receptor-like serine/threonine-protein kinase ALE2 541 757 - -
Lapu10g00471 856 ProSitePatterns Protein kinases ATP-binding region signature. 471 493 IPR017441 GO:0005524
Lapu10g00471 856 ProSitePatterns Serine/Threonine protein kinases active-site signature. 587 599 IPR008271 GO:0004672|GO:0006468
Lapu10g00471 856 PANTHER OS01G0750732 PROTEIN 192 761 - -
Lapu10g00471 856 Pfam Protein tyrosine and serine/threonine kinase 468 738 IPR001245 GO:0004672|GO:0006468
Lapu10g00471 856 CDD STKc_IRAK 471 739 - -
Lapu10g00471 856 ProSiteProfiles Protein kinase domain profile. 465 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00471 856 MobiDBLite consensus disorder prediction 35 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00471 Lapu-Chr10 7070739 7076353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00471 197 851 Receptor kinase-like Gene Family AT5G56890 59.940 0.0 761
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Lapu10g00471 PK_Tyr_Ser-Thr 8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00471 - - gmx:100814040 1440.63