Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00468 ATGCAGCCGAAATCTCACACCCCTTTTTTTGTTTCTCCCCAAAAGGCCATGAACAACAATAACAACACCACCAACACCAACAACAGAATCTCAACAACAAGAAATGGCAACAGCACCACCCAGGCTTGCGCTGCATGCAAGTACCAACGCAGAAAGTGTGCACCTGATTGCATTCTCGCACCTTATTTCCCTCATGATCGCCAGCGACAGTTCCTCAACGCTCACAAGTTGTTTGGTGTAAGCAACATCACCAAGATCATCAAGGTTCTCAGCCCTCACGACAAGGACCAAGCCATGCGCACCATAATCTACCAATCTGACATGCGTGCCACAGACCCTGTTGGAGGCTGCTATAGGTACATTCTCGACCTTCAGGCTCAGATTGAGTACTGCCGTGCCGAGCTCGAACTCGTCCTTCAACAACTCGCCATGTTTCGGGCTCAGGCTCAGCACCAGAATCAACATCAGTATCAGCAACAACATGGTATCTATGCTCCAAACAATGTTAACGTCACTGTCAATGGAGATGGTGAGGTTTTGAACGCTGATCCTATGGGGTTGTATAACCAGCAACAGTATCAGTGTCTGCAGCCACACCAACAGGAGCAGTATGTTATGCTGCATGAAAATGGGAGCCAAAACTGCAACGCCGCCACTCCTTTGCAGGAACAGATCAACACGTGGGCTGTGCAGAACACTGCTGTGTCGCTTTCTTCGTTGTCCTTGCAAGGGCAGAGCAGTAATGTTAGTGATGAGTATGATCACAAGCCCGTCATTGACATAGATTCTGATGAGAGAAGTGAGTTAGGGTTCGAGTCTGAAGAATTAGTCCATCGCAGTGATGAGGCAGTGTTGTTTAAGATAGATGATGCAGTAATAAAAGCGGAGGCTGACTGCATGCAACAAGCTCAAGATCATGACCTGAAAGGTGCAGCAACATCGTTTACCCTCACAAATTGTACTTGCTGA 969 0.4778 MQPKSHTPFFVSPQKAMNNNNNTTNTNNRISTTRNGNSTTQACAACKYQRRKCAPDCILAPYFPHDRQRQFLNAHKLFGVSNITKIIKVLSPHDKDQAMRTIIYQSDMRATDPVGGCYRYILDLQAQIEYCRAELELVLQQLAMFRAQAQHQNQHQYQQQHGIYAPNNVNVTVNGDGEVLNADPMGLYNQQQYQCLQPHQQEQYVMLHENGSQNCNAATPLQEQINTWAVQNTAVSLSSLSLQGQSSNVSDEYDHKPVIDIDSDERSELGFESEELVHRSDEAVLFKIDDAVIKAEADCMQQAQDHDLKGAATSFTLTNCTC* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00468 322 Pfam Lateral organ boundaries (LOB) domain 42 137 IPR004883 -
Lapu10g00468 322 ProSiteProfiles LOB domain profile. 41 142 IPR004883 -
Lapu10g00468 322 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 40 189 - -
Lapu10g00468 322 MobiDBLite consensus disorder prediction 1 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00468 Lapu-Chr10 7044683 7046411 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00468 41 156 AS2 family AT3G13850 77.586 5.40e-59 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lapu10g00468 LOB 4.7e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00468 - - vum:124830493 560.451