LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu10g00468	ATGCAGCCGAAATCTCACACCCCTTTTTTTGTTTCTCCCCAAAAGGCCATGAACAACAATAACAACACCACCAACACCAACAACAGAATCTCAACAACAAGAAATGGCAACAGCACCACCCAGGCTTGCGCTGCATGCAAGTACCAACGCAGAAAGTGTGCACCTGATTGCATTCTCGCACCTTATTTCCCTCATGATCGCCAGCGACAGTTCCTCAACGCTCACAAGTTGTTTGGTGTAAGCAACATCACCAAGATCATCAAGGTTCTCAGCCCTCACGACAAGGACCAAGCCATGCGCACCATAATCTACCAATCTGACATGCGTGCCACAGACCCTGTTGGAGGCTGCTATAGGTACATTCTCGACCTTCAGGCTCAGATTGAGTACTGCCGTGCCGAGCTCGAACTCGTCCTTCAACAACTCGCCATGTTTCGGGCTCAGGCTCAGCACCAGAATCAACATCAGTATCAGCAACAACATGGTATCTATGCTCCAAACAATGTTAACGTCACTGTCAATGGAGATGGTGAGGTTTTGAACGCTGATCCTATGGGGTTGTATAACCAGCAACAGTATCAGTGTCTGCAGCCACACCAACAGGAGCAGTATGTTATGCTGCATGAAAATGGGAGCCAAAACTGCAACGCCGCCACTCCTTTGCAGGAACAGATCAACACGTGGGCTGTGCAGAACACTGCTGTGTCGCTTTCTTCGTTGTCCTTGCAAGGGCAGAGCAGTAATGTTAGTGATGAGTATGATCACAAGCCCGTCATTGACATAGATTCTGATGAGAGAAGTGAGTTAGGGTTCGAGTCTGAAGAATTAGTCCATCGCAGTGATGAGGCAGTGTTGTTTAAGATAGATGATGCAGTAATAAAAGCGGAGGCTGACTGCATGCAACAAGCTCAAGATCATGACCTGAAAGGTGCAGCAACATCGTTTACCCTCACAAATTGTACTTGCTGA	969	0.4778	MQPKSHTPFFVSPQKAMNNNNNTTNTNNRISTTRNGNSTTQACAACKYQRRKCAPDCILAPYFPHDRQRQFLNAHKLFGVSNITKIIKVLSPHDKDQAMRTIIYQSDMRATDPVGGCYRYILDLQAQIEYCRAELELVLQQLAMFRAQAQHQNQHQYQQQHGIYAPNNVNVTVNGDGEVLNADPMGLYNQQQYQCLQPHQQEQYVMLHENGSQNCNAATPLQEQINTWAVQNTAVSLSSLSLQGQSSNVSDEYDHKPVIDIDSDERSELGFESEELVHRSDEAVLFKIDDAVIKAEADCMQQAQDHDLKGAATSFTLTNCTC*	323

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lapu10g00468	322	Pfam	Lateral organ boundaries (LOB) domain	42	137	IPR004883	-
	Lapu10g00468	322	ProSiteProfiles	LOB domain profile.	41	142	IPR004883	-
	Lapu10g00468	322	PANTHER	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	40	189	-	-
	Lapu10g00468	322	MobiDBLite	consensus disorder prediction	1	33	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lapu10g00468	Lapu-Chr10	7044683	7046411	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lapu10g00468	41	156	AS2 family	AT3G13850	77.586	5.40e-59	189

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	LOB	Lapu10g00468		LOB	4.7e-36	No_clan