Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00456 ATGGGTGGTTCAGGAAGATGGCTTAAGTCGCTCATTTCTCTCAGGAAGCCCTCCACAAATGATCAAGAGAAGGGTGGTGACAAGAGTAAGAGAAGGTGGAAGTTATGGAGGGGGACTTCAGAAGGGTTTGGGATTGGGTCATCCACGCAGAAGGGGCAGGGTGGTGGTGGTGGGTCCTTTTTGGTGGATGATGGAGCATTTGCTGCTGCTTTGGCTGCTGTCGTAAGAACTCCACTCAAAGACTTCATGGTCATCAAGCAGGAATGGGCTGCCATTCGAATACAAGCAGTGTTTCGAGGTTTCTTGGCAAGACGAGCTTTGAGGGCCCTGAGGGCAGTGGTGAGGTTGCAAGCTATATTTCGTGGTTGGCAAGTGAGGAAGCAAGCAGCTGTTACTCTAAGATGCATGCAGGCTCTTGTGCGAGTTCAAGCACGTGTCAAGGCAAGGAATGTGGGGAAAGCTGTCGGTGAGCCCTGCAATGAAGCTGATCCTGTTAAGAAAGCTGAGCAAGGATGGTGTGACATTCCAGGAACTGCGGAAGAAGTTAAGGAAAAATTACAGATGAGGCAGGAAGGAGCAATTAAGAGGAATAGGACAAAGGCATACTCTCAGTCTAAGCAGAAATCAACAGCGAGTGCTAGTCCAAACTCAAGAGCTGCTAAGCCAGTGATTCCTCTCAAGCACCGTAGCCTAGATAGTAAGAGCTCAGGATGGGGTATGTTAGATCGCTGGATGGCTGCAAAGCCATGGGAGAGCAGGTCGATGGTAGACATGCATTTGGACTCATCTGACACGACTCCAGTGACTAGTAAGAGTGATCATTTTGTTCTTCCCTTTAATTCTGATCAACGAAATGGCTCAGTCAAAGCAAGAAGGAATGGTGTGATAACCAGGATTTCATCTAAATCACTTACAACTAGTCAATCAACTCCATCATCTTCTTCCGTAAGCTCTGAATGCATGTATGATGATAGCCCTTTGTCAACTTCATGCACATCTGAATCACCACCTGTACCATCTACCAACAATGTTATGGTGGAAGCAACAGAGGAAGGAAATGTTTGTAAACCAAGCTACATGAATCTGACAGCATCAACCAAAGCTAAAGTGAAACCCTATAGGTGTTTTTCTCAGAATTCTAAGAGAATCTTTATGGATGATTGTGTGTCACTTAGCGGAGTTACTAGAAGCAGTTCTGGTTCCTATCCTTCTGCTAATATGTGGAAGAATATCTATGCAACACCTTTAAGGTCACGTTATCAAAAGCGATATACATTGGAAGATAAGTAG 1290 0.455 MGGSGRWLKSLISLRKPSTNDQEKGGDKSKRRWKLWRGTSEGFGIGSSTQKGQGGGGGSFLVDDGAFAAALAAVVRTPLKDFMVIKQEWAAIRIQAVFRGFLARRALRALRAVVRLQAIFRGWQVRKQAAVTLRCMQALVRVQARVKARNVGKAVGEPCNEADPVKKAEQGWCDIPGTAEEVKEKLQMRQEGAIKRNRTKAYSQSKQKSTASASPNSRAAKPVIPLKHRSLDSKSSGWGMLDRWMAAKPWESRSMVDMHLDSSDTTPVTSKSDHFVLPFNSDQRNGSVKARRNGVITRISSKSLTTSQSTPSSSSVSSECMYDDSPLSTSCTSESPPVPSTNNVMVEATEEGNVCKPSYMNLTASTKAKVKPYRCFSQNSKRIFMDDCVSLSGVTRSSSGSYPSANMWKNIYATPLRSRYQKRYTLEDK* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00456 429 Pfam IQ calmodulin-binding motif 111 128 IPR000048 GO:0005515
Lapu10g00456 429 Pfam IQ calmodulin-binding motif 89 108 IPR000048 GO:0005515
Lapu10g00456 429 Gene3D - 85 138 - -
Lapu10g00456 429 MobiDBLite consensus disorder prediction 190 222 - -
Lapu10g00456 429 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 71 129 IPR027417 -
Lapu10g00456 429 ProSiteProfiles IQ motif profile. 87 115 IPR000048 GO:0005515
Lapu10g00456 429 ProSiteProfiles IQ motif profile. 111 138 IPR000048 GO:0005515
Lapu10g00456 429 MobiDBLite consensus disorder prediction 197 217 - -
Lapu10g00456 429 MobiDBLite consensus disorder prediction 299 321 - -
Lapu10g00456 429 PANTHER IQ-DOMAIN 5-RELATED 1 404 - -
Lapu10g00456 429 SMART iq_5 86 108 IPR000048 GO:0005515
Lapu10g00456 429 SMART iq_5 109 130 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00456 Lapu-Chr10 6942179 6945182 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00456 1 412 IQD Protein Family AT1G72670 43.852 1.14e-89 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00456 - - vun:114166337 679.093