Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00455 ATGAGCTTCAACAAGTGCAGGAACCTTGACGAGCTGTATAAGCCTGATGGGTTGGATGAGGTTATTACTGAGAAATCTAAAAGCTCAAAGAGAAAGAAGGTGGGGAATCTGAAGCTGCAAACCTCATTCTCCTTCAAGTATCTACTTTCTGATAATTCTGATTCAAAGGAGAAAGTTGATGGCTTGCTCAATAAACAAAGCCCCCCAATTGTGTTGCCGAAATCAGAAATTTTGTTTTCGGCGAAGTCCGTTGGGCATCGTGATGTGGCTGCAATCAAGCTGCAGAAGGTTTACAAGGGCTACAGGACTAGAAGAAATCTTGCCGATTGTGCAGTTGTTTGTGAGGAGCTATGGTGGAAAGCCTTAGACTTTGCTGCACTTAGCAGGTGTTCCCCATCAAAATTTGACTATGGTAAATCAGAAACAGCTAGTTCAAAATGGGCAAGAGCTAGGACCATGGCTGCTAAGGTGGGAAAAGGTTTGTGCAAAGATGATAAGGCGCAGAAATTAGCTCTAAGACACTGGCTTGAAGCTATTGATCCACGTCACCGTTATGGTCACAATCTGCACTTATACTATGATGTTTGGTTTCACAGCCAGAGTTCACAACCCTTTTTCTATTGGTTGGACGTTGGAGATGGGAAAGAAGTGAATCATGAAGAGTGCCTAAGAAGTGAATTGTATAAGCAATGCATAAAGTATCTTGGACCCAAAGAGAGGGAAGCATATGAAGTGGTTATTGAGGGAGGAAGGCTTGTTTATAAAAAGAGCCAGAACCTTGTACACACTGTGGAGGGATCTAAGTGGATTTTTGTACTCAGCTCTTCTAGAATTTTGTACGTTGGTGAGAAAAAGAAAGGCCAATTTCAGCACTCAAGTTTTTTGGCTGGAGGTGCTACTATTGCTTCTGGAAGATTGGTAGCCCAAGATGGAATTATTGATGCTATATGGCCCTACAGCGGTCATTACCGTCCTACAATGAAGAACTTTATGGAATTCATTGGGTTCTTAATGGAACATAATGTGGACTTGACCAATGTAAAGAAGTATGCAATTGATGACGACATCCCACCTTCAAAACCTGTTGAAGAGGAGCTACAGTTTGAGTCCAAAAGGGCTAACAATGCTAGTTCAAGTGGCTTTACCATTGCCAAAAATAGCAATGAAGACAACATAGGTCAATCTGGTACCAATATGCAAAGTTCAGAAGTTAAAGAGAGGAAAGCATTGTCAAGAAAATGGACAACTGGAGCTGGTCCTAGAATTGGTTGTATGAGAGAGTACCCTGCAAAACTCCAAGTCAAGGCACTTGAACAGCTGAATCTATCACCTAGAGTCAACCATGGAAAAGTAGCAGCCAAGGCACCCATTCCCTCACCAAGGCCTAGTCCAAAAATCCACCTATCCCCAAGACTTGTGCACATGGGAATTCCTAGCCCATGA 1443 0.4262 MSFNKCRNLDELYKPDGLDEVITEKSKSSKRKKVGNLKLQTSFSFKYLLSDNSDSKEKVDGLLNKQSPPIVLPKSEILFSAKSVGHRDVAAIKLQKVYKGYRTRRNLADCAVVCEELWWKALDFAALSRCSPSKFDYGKSETASSKWARARTMAAKVGKGLCKDDKAQKLALRHWLEAIDPRHRYGHNLHLYYDVWFHSQSSQPFFYWLDVGDGKEVNHEECLRSELYKQCIKYLGPKEREAYEVVIEGGRLVYKKSQNLVHTVEGSKWIFVLSSSRILYVGEKKKGQFQHSSFLAGGATIASGRLVAQDGIIDAIWPYSGHYRPTMKNFMEFIGFLMEHNVDLTNVKKYAIDDDIPPSKPVEEELQFESKRANNASSSGFTIAKNSNEDNIGQSGTNMQSSEVKERKALSRKWTTGAGPRIGCMREYPAKLQVKALEQLNLSPRVNHGKVAAKAPIPSPRPSPKIHLSPRLVHMGIPSP* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00455 480 MobiDBLite consensus disorder prediction 371 412 - -
Lapu10g00455 480 MobiDBLite consensus disorder prediction 371 404 - -
Lapu10g00455 480 ProSiteProfiles IQ motif profile. 87 116 IPR000048 GO:0005515
Lapu10g00455 480 PANTHER IQ DOMAIN-CONTAINING PROTEIN IQM3 29 466 IPR044159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00455 Lapu-Chr10 6936033 6938929 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00455 - - pvu:PHAVU_010G137300g 889.797
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00455 10 6936033 6938929 Lapu5g00250 5 2043281 2045757 PCT