Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00451 ATGGTTTCCCGCTTCGGAGAAAAACACGATGTTTTTTTGAGCTTCAGAGGACCAGACACGCGAACAAACTTCACAAGCCATCTTCGCAGTGCTCTCACTCAGAAATCAATCACCACATTCATAGATTACGAACTCACCAGAGGAGACTACACTTGGCCAGCCCTTGCTAGAGCAATCGAGGAGTCCGTTGTGTCAATTGTTGTTTTCTCCGAAAACTATGCTTCCTCGACGTGGTGCTTGAAAGAACTGGCGCACATACTCGAATGCAGAAGAAAGCGGGGTCTGGTTGTTATACCCATCTTCTATCAGGTAGATCCCACACACGTAAGGAAGCTGAGTGGGAGTTTCGAAACATCATTCGCAAAGCATGAGCGAGACACCACATCATCGGACCGAAAATCCCACAGGCAGGATGTTTCTAGGTGGAAAGCTGCTCTCAAAGAAGCAGCCAATATTTGTGGATGGGACTCCAGATCATACAGAGACGAAGCTCAGGTTATCCAGAATCTTGTCAATGATGTATTGCAAAAGCTACACCTGAGATATCCTACAGAACTAAAAGGTTTAGTCAGAATTAAAAATACTTGTGGAAAGGTGGAATTGTTACTGCAAAAATCTCGAGTCATTGGAATTTGGGGTATGGGGGGAATTGGTAAGTCAACCATTGCTAAAGCCTTGTTTGCCAAATACTTTCCCTATTTTGATCATGTCTGCTTTGTGGCCAATGCAAAAGAACTTTCGCTGGATAAGCTTTTCTCTGAGCTATTCAGAGAGGAAGTTTCCACATCAAAGGTTGTAGGATCAACATTTGATATGAGTAGACTCAGAAGAAAAAGGATTTTCATTGTACTTGATGATGTGGATTGTTTAGACCTATTGGAATATTTATGTAGAGAGTATGAGTACCTAGATAATAGTAGTAAACTCATCATAACAACACGAGATAAGCAATTGCTTGAGGGAAGAGTTGATCAGATCTACGAGGTCAAGAAATGGGAAACCACAGCATCTTTAAAGCTTTTTTGCTTAGAAGCCTTCAAGGAAAGACATCCCAAAAAAGGTTATGAGAGTCTCTCAGAAACTGCAGTTGAATATGCTGGTGGCGTTCCATTAGCTCTTAAAGTTTTGGGTTCATATCTTCGTTCAAAAGGTATCAATTTTTGGGAAAGTACTATAAGAAAACTCAGCATATATCCTAACGAGAGAATTCAGAAAGTGTTAGAAGTGAGCTACACTGGATTACATGATCTAGAAAAGAATATATTTTTGGACATTGTATTTTTTTTCAAAGAAAAACAGAAAGATCATGTCATAAGGATACTAGATGCCTGTGGTTTTGAAGCAACTAGTGGAATAGAAGTTCTTGCAGACAAAGCTTTATTAACAATTTCATATAGAAAGATAATACATATGCATGACTTGCTGCTAAAAATGGGTTTAGAAATAGTACGTCAAGAGAGTACTGGGGATCCTGGTAGCCGTAGTCGATTGAAGGATAATGAAGCTAGGGAAGTGATTGAAGAAAACAAGGGAACTGGTGCTATTCAAGGCATATCATTAGATTTGTCTCAAATTAAAGGTTTAATTTTGCATGCTGACACATTCACAAAGATGAAAACCTTAAGATTTCTGAAATTCTACAACACATTGGGTCAGAGTGCTAGAGATACATACCTTGACCTTCCTGCAACTCTTGAGCGGTTTTCTGATAAACTGAGGTACATTGAGTGGATTGGATACCCATTTGTGTCTCTTCCATCACCTTTTTGTGCTAAGTTTCTTGTTGAGATTCTCATGCCCCACAGCAAAGTAAAACAACTTTGGCAGGGGATCCAGGAGCTCGATTATTTAGAAGGAATTGACCAAAGACAAAGCAAGCAGTTTGAGGAGCTTCCAGATTTGTCTAAGGCACCAAGACTTAAATGGGTGAATCTCTCCGGTTGTGAAAGTTTGCGGTATCTTCATCCATCTGTTTTATCCTCAATATCGCTTGTTACTTTGATACTAGATAAGTGTACAAACCTTAAGAGAGTTAAAAGTGAGAAACATTTAAAATCTCTAGAGAAGATCAGTGTCAATGGCTGCTTAAATCTGGTGGAATTTGGAGTTTCCTCAGATTTAATTGAAAATTTGGATTTAAGCAATACAGGAATCCAAACATTGGACACATCAATAGGCAGTATGCATAAACTTAAGTGGCTCAATCTGGAGGGCTTAAAACTCAAGCATATTTTAAGAGAGTTATCTTGCTTGACATCTCTCAAGGTGCTAAAGATTTCTGATAATGGACTAGTAATTGACAAACAACAAATACATGTCCTGTTTAATGGATTAAGGTACTTACAAATACTATACTTGAAGGATTGTAGTAAGTTGTTTGAACTCCCTGACAACATCAGTCTCTTAACACAATTACAGGAGCTAAGGTTAGACATAAGCGATTTGAAAAGGTTGCCTGAAAACATTAAGAATCTTCACAAGTTGGAAATTCTATCCGTGGAGGATTGCAAGGAGCTTCTTTGCCTACCAACGTTTCCATCCCTCATCAGATACTTACGTGCCACTAACTGCACGTCATTGGTGTCAGTGTCAAACTTAAAGACTTTAGCAATAGAGATGTTGGGAATGACTAAACGCATTACATTCAAGAACAGCGAGAATTTGGATGGACATTCACTCGGAATTATTTTCGAAAACCTCTATTTAACGATGATGAGTGCTGCATATCATAATGTGTTAGTAAGAAGATCATATGGGACATACTACAGCTGCAACTATACGAGTGTTGAGCTTTGTTTACCCGGAGGGAGTATCCCTGAGCAGATCCATTATCGATCCACTAAGTCCTCCATTACCATTGTACTTCCTCCACGTTCTGAACTACTGGGCTTCATTTACTCTGTGGTTCTTTCTCCAGCTGGTGGAATAAAGACTTATGGCACTAAGATATTTTGTAAATGCCACTTGCCAGAAGAAGGTATAAAGACAACATGGCTATATGGTGATATCAGAGGATTGAAGTCGGATCATGTTTATGTATGGTATGATCCATTACACTGTGACAGCATTCTCAAATATTATGAACGACCAGAGGTTTGTTTTGAGTTCTGTGTTGCAAATGACAAGGGGGAAGTTGACGGTTCCATTTGTATTAAAGAATGTGGGGTAGGCCTTGTAAATGTTTTAGGCGTGCATAGTGTTTTACAAGAGTTGGACTTGGATTCGGATAAGAAAAAGGAGTTGGTTCATGGAGTGGAGTCGGAATCAAAGCTTGGGAATCAACAGCGGGATTGGAGTGAATCAAGCTCTTCTGATAATGCAGAATCAGACTCAGAGATGGTTAAAGCAGATTCAGCTGAAAAAGGTAAATCTACTTACAAGGAAACCGAAACTGATTCTGGAACAAATGCGGTCAAATACGAAGGTAATCTAGAAGCGCCAATTAAATCAGATGCAACATTGCATGAGAACGTCAAGTCACATTCAGACAATGAAAATGTGTTTATAGAAAAGTCAATCACGCAATCAAAGGTAGTAGTGATGGTTGAGCTAGAGAACACAGAAACCAAGAAAATCCAGAGCACTGCTAAAAGAGGTCCCAAAGAAAAATCCAGAGTCTACAGAAATTGTAGTCAATGA 3639 0.3924 MVSRFGEKHDVFLSFRGPDTRTNFTSHLRSALTQKSITTFIDYELTRGDYTWPALARAIEESVVSIVVFSENYASSTWCLKELAHILECRRKRGLVVIPIFYQVDPTHVRKLSGSFETSFAKHERDTTSSDRKSHRQDVSRWKAALKEAANICGWDSRSYRDEAQVIQNLVNDVLQKLHLRYPTELKGLVRIKNTCGKVELLLQKSRVIGIWGMGGIGKSTIAKALFAKYFPYFDHVCFVANAKELSLDKLFSELFREEVSTSKVVGSTFDMSRLRRKRIFIVLDDVDCLDLLEYLCREYEYLDNSSKLIITTRDKQLLEGRVDQIYEVKKWETTASLKLFCLEAFKERHPKKGYESLSETAVEYAGGVPLALKVLGSYLRSKGINFWESTIRKLSIYPNERIQKVLEVSYTGLHDLEKNIFLDIVFFFKEKQKDHVIRILDACGFEATSGIEVLADKALLTISYRKIIHMHDLLLKMGLEIVRQESTGDPGSRSRLKDNEAREVIEENKGTGAIQGISLDLSQIKGLILHADTFTKMKTLRFLKFYNTLGQSARDTYLDLPATLERFSDKLRYIEWIGYPFVSLPSPFCAKFLVEILMPHSKVKQLWQGIQELDYLEGIDQRQSKQFEELPDLSKAPRLKWVNLSGCESLRYLHPSVLSSISLVTLILDKCTNLKRVKSEKHLKSLEKISVNGCLNLVEFGVSSDLIENLDLSNTGIQTLDTSIGSMHKLKWLNLEGLKLKHILRELSCLTSLKVLKISDNGLVIDKQQIHVLFNGLRYLQILYLKDCSKLFELPDNISLLTQLQELRLDISDLKRLPENIKNLHKLEILSVEDCKELLCLPTFPSLIRYLRATNCTSLVSVSNLKTLAIEMLGMTKRITFKNSENLDGHSLGIIFENLYLTMMSAAYHNVLVRRSYGTYYSCNYTSVELCLPGGSIPEQIHYRSTKSSITIVLPPRSELLGFIYSVVLSPAGGIKTYGTKIFCKCHLPEEGIKTTWLYGDIRGLKSDHVYVWYDPLHCDSILKYYERPEVCFEFCVANDKGEVDGSICIKECGVGLVNVLGVHSVLQELDLDSDKKKELVHGVESESKLGNQQRDWSESSSSDNAESDSEMVKADSAEKGKSTYKETETDSGTNAVKYEGNLEAPIKSDATLHENVKSHSDNENVFIEKSITQSKVVVMVELENTETKKIQSTAKRGPKEKSRVYRNCSQ* 1213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00451 1212 SUPERFAMILY L domain-like 471 867 - -
Lapu10g00451 1212 PRINTS Disease resistance protein signature 208 223 - -
Lapu10g00451 1212 PRINTS Disease resistance protein signature 366 380 - -
Lapu10g00451 1212 PRINTS Disease resistance protein signature 274 288 - -
Lapu10g00451 1212 PRINTS Disease resistance protein signature 823 839 - -
Lapu10g00451 1212 MobiDBLite consensus disorder prediction 1110 1128 - -
Lapu10g00451 1212 Gene3D - 333 415 IPR042197 -
Lapu10g00451 1212 Gene3D - 176 326 IPR027417 -
Lapu10g00451 1212 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 188 425 IPR027417 -
Lapu10g00451 1212 Gene3D - 6 175 IPR035897 -
Lapu10g00451 1212 MobiDBLite consensus disorder prediction 1190 1205 - -
Lapu10g00451 1212 Pfam Leucine Rich Repeat 593 612 IPR011713 -
Lapu10g00451 1212 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 700 IPR044974 GO:0006952
Lapu10g00451 1212 MobiDBLite consensus disorder prediction 1088 1109 - -
Lapu10g00451 1212 Pfam TIR domain 8 184 IPR000157 GO:0007165
Lapu10g00451 1212 Pfam C-JID domain 933 1059 IPR045344 -
Lapu10g00451 1212 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 155 IPR035897 -
Lapu10g00451 1212 ProSiteProfiles TIR domain profile. 7 178 IPR000157 GO:0007165
Lapu10g00451 1212 Pfam NB-ARC domain 206 405 IPR002182 GO:0043531
Lapu10g00451 1212 MobiDBLite consensus disorder prediction 1190 1212 - -
Lapu10g00451 1212 MobiDBLite consensus disorder prediction 1084 1141 - -
Lapu10g00451 1212 FunFam Disease resistance protein (TIR-NBS-LRR class) 6 180 - -
Lapu10g00451 1212 Gene3D Ribonuclease Inhibitor 484 705 IPR032675 -
Lapu10g00451 1212 Gene3D Ribonuclease Inhibitor 706 888 IPR032675 -
Lapu10g00451 1212 SMART till_3 8 152 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00451 Lapu-Chr10 6890860 6900055 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00451 9 831 WRKY Transcription Factor Family AT4G12020 30.142 6.43e-84 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00451 - - vun:114165831 2013.04