Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00450 ATGACACGGGGGAGGATAAGGGCGAGGCTCCGGAGGAGCCATCTTTACACATTTGGTTGCCTTAAGCCTTCTACCCTTGAGGAGGCACCTCATCCACTTCAAGGTCCCGGGTTCTCGCGAACTGTGTATTGCAATCAACCTCTTCTCCATGAAAAGAAGCCACTATATTACTGCAGGAATGATATATCCACGACTAAGTACAATGTTCTTACGTTTTTCCCCAAGGCACTCTTTGAACAATTCCGTAGGGTTGCTAATATATACTTCCTTTTGGCTGCGTGTCTCTCGGCCTCTCCAATTTCACCTTTCAGCCCACTGAGTATGATTGCTCCTTTGGCATTTGTTGTGGGGCTCAGTATGGCAAAGGAAGCATTGGAAGATTCTCGTAGGTTCGTTCAGGATGTCAAAGTTAATCGCCGAAAGGTTAATCGTCATAAAAGCGATGGTAATTTTGGTCCCAGGTCGTGGCAGAACATTATGGTTGGGGATGTGCTAAAAGTGCAAAAGGATCAATTTTTTCCAGCTGATTTGCTTCTGTTGTCATCTAGTTATGAGGATGGGATATGCTATGTGGAGACTATGAATTTAGATGGTGAGACCAACTTGAAGGTGAAAAGATCTTTAGAGGCTACCTTGAATCTAGACTGTGACGAAGTTTTTAAAGATTTCACTGGAACAATACGTTGTGAAGACCCAAACCCGAATCTTTATACATTTGTTGGAAACTTAGAGTATGAGCGCCAGATTTATCCTCTTGATCCTAGTCAAATTCTTCTCCGAGATTCTAAGCTCAGGAACACTGAATACATCTATGGGGTGGCCATTTTCACTGGTCATGATAGCAAAGTCATGCAAAATTCTACAAAATCTCCTTCAAAACGAAGCACAATAGAAAAGAAGATGGATTATATCATATACACACTCTTCACTGTCCTTATTTTGATATCTGTTATTAGTTCCATAGGATTTGTCATCAAGACTAAGTACCAAACCCCGGATTGGTGGTATTTACGGCCGGACAATATTGAATACCAGTATGATCCCAACAAAATTGGAGTAGCTGGAATGAGTCATCTGATTACTGCGCTCATTCTTTATGGATATTTGATACCCATCTCACTTTATGTTTCCATCGAGGTTGTAAAGGTGTTACAGGCTACCTTCATCAACCAAGACATTCAAATGTATGATGACGATACTGGGACTCCAGCTGATGCACGGACATCAAATTTGAATGAAGAGTTGGGTCAGGTAGATACTATCCTGTCAGATAAAACTGGAACTTTGACCTGCAATCAGATGGACTTTTTGAAGTGCTCCATTGCTGGTACTGCATATGGTGTGCGCTCCAGTGAAGTTGAAGTTGCTGCAGCAAAGCAGATGGCTTCTGATATTGAGGACCAGGATTCAGATCTCTCCAATTTCCCCCTGCCTAAGGCTAAAGTGCGAGTTTCATGGGATGATGTTAAAAAAGATGAAGAAATTGGACTGGAAACTGTTGTTACTTCCAAAGGAGAAGAGGATCCAAGGCCTGCCATAAAGGGATTTGGTTTTGAAGATGACCGTCTCATGAATTGTAATTGGTTGAAAGAGTCCAATGCTGATGACCTTTTGATGTTCTTCCGAATACTAGCAGTTTGCCACACTGCCATTCCTGAGCTGAATGAGGAGACCGGTGTTTATACATATGAAGCTGAGTCACCCGATGAAGGGGCCTTTCTTGTAGCAGCAAGAGAATTTGGCTTTGAGTTTTGCAGAAGGACTCAGTCAAGTATTTTCATACGTGAAAGGTTTTCTGCTTCTAGACAAGTGGTTGAAAGAGAGTACAAACTTTTGAATCTGCTGGATTTTACTAGTAAAAGAAAACGTATGTCAGTGATCGTGCGTGATGAGGAGGGCAGTATCTTTCTTATGTGCAAAGGGGCTGACAGTATCATATTTGATCGCATGTCAAAGAATGGAAAAATGTATTTAGAGGCCACTACCAAACATCTAAATGACTACGGAGAAGCTGGTTTGAGAACACTAGCCCTGGCTTATAGAAAACTTGATGAGCAAGAATACTCGGCTTGGAACAATGAATTTCAGAAAGCCAAAGCAGCTGTTGGGGCTGACAGAGATTCAATGCTTGAGCGAGTATCAGATATGATGGAAAAAGAGTTGATTCTTGTTGGGGCTACTGCTGTGGAAGACAAACTGCAGAAAGGGGTTCCCCAATGTATTGATAATCTTGCTCAAGCTGGTCTTAAGATCTGGGTGTTGACAGGGGATAAGATGGAAACTGCAATCAACATTGGTTTTGCTTGCAGTTTGCTTCGACAGGGCATGAAGCAGATCTGTATAACTACTCCGGTTTCAGATTCTGTAACCAGTGATGTCAAACAGTTCTTTTGTTTAACACCCCAGGCCATCAAGGATAACATTTCAAACCAACTCACCAATGCTTCCCAAATGATAAAACTGGAGAAGGATCCTCATGCTGCATTTGCGATAATTATTGATGGGAAAACTCTGACATATACTTTAGAAGATGATATGAAGCACCAATTTTTGGCATTGGCAGTTGATTGTGCATCTGTCATCTGTTGTAGGGTGTCTCCCAAGCAAAAGGCACTGGTAACAAGGTTAGTGAAACAAGGTACTGGGAAGACTACTCTAGCAATAGGTGATGGTGCAAATGATGTTGGCATGATTCAAGAAGCAGATATTGGTGTTGGAATCAGTGGGGTTGAAGGTATGCAGGCAGTGATGGCTAGTGACTTTGCAATTGCCCAATTTCGATTTCTAGAGAGGCTTCTGGTAGTCCATGGACATTGGTGTTACAAGAGAATTGCACAAATGATATGTTATTTCTTCTACAAGAATATTGCATTTGGCCTCACCATCTTCTATTTTGAGGCTTTCACAGGCTTCTCTGGTCAATCAGTTTATGATGACTGGTATATGATATTGTTCAATGTTGTTCTGACATCATTACCTGTTATTTCACTTGGTGTTTTTGAACAAGATGTTCCATCAGAAGTTTGTTTACAGTTTCCTGCACTATATCAGCAAGGACCCAGGAATTTATTCTTTGATTGGTATAGAATATTGGGATGGATGGGCAATGGTCTCTATTCCTCCCTCATCATCTTCTTCCTCATCGTCACCATCTTCTACGACCAAGCATTTCGTGGAGATGGCCAGGTAGCTGACATGGCTGTTGTTGGGACCACTATGTTCACTTGCATCGTCTGGGCTGTCAACTGTCAGATTGCGTTGACAATGAGCCACTTTACATGGATTCAGCACCTGTTTGTATGGGGAAGCATAGCCACTTGGTACATCTTTCTCATGTTGTATGGAATGCTTTCTCCAGAATATTCCAAGAGTGCCTACCAAATACTGGCCGAAGCTCTTGGTTCTGCGCCTATTTATTGGATAACAACCATTTTAGTTACAGTTACTTGCAATCTTCCTTATTTTGTCCACATATCCTTCCAAAGATGTTTCCATCCCATGGATCATCACATTATCCAAGAAATCAAGTACTACAAAAAGGATATTGAAGACCAACACATGTGGACAAGGGAGCGTTCTAAAGCCAGACAGGAAACCAAGATTGGTTTCACAGCAAGAGTGGAAGCAAAGATCAGGCAACTGAAGGGAAGGCTGCAGAAGAAGCAATCTGCCTTGACTATTTCAACCCCATCGTGA 3696 0.4196 MTRGRIRARLRRSHLYTFGCLKPSTLEEAPHPLQGPGFSRTVYCNQPLLHEKKPLYYCRNDISTTKYNVLTFFPKALFEQFRRVANIYFLLAACLSASPISPFSPLSMIAPLAFVVGLSMAKEALEDSRRFVQDVKVNRRKVNRHKSDGNFGPRSWQNIMVGDVLKVQKDQFFPADLLLLSSSYEDGICYVETMNLDGETNLKVKRSLEATLNLDCDEVFKDFTGTIRCEDPNPNLYTFVGNLEYERQIYPLDPSQILLRDSKLRNTEYIYGVAIFTGHDSKVMQNSTKSPSKRSTIEKKMDYIIYTLFTVLILISVISSIGFVIKTKYQTPDWWYLRPDNIEYQYDPNKIGVAGMSHLITALILYGYLIPISLYVSIEVVKVLQATFINQDIQMYDDDTGTPADARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGTAYGVRSSEVEVAAAKQMASDIEDQDSDLSNFPLPKAKVRVSWDDVKKDEEIGLETVVTSKGEEDPRPAIKGFGFEDDRLMNCNWLKESNADDLLMFFRILAVCHTAIPELNEETGVYTYEAESPDEGAFLVAAREFGFEFCRRTQSSIFIRERFSASRQVVEREYKLLNLLDFTSKRKRMSVIVRDEEGSIFLMCKGADSIIFDRMSKNGKMYLEATTKHLNDYGEAGLRTLALAYRKLDEQEYSAWNNEFQKAKAAVGADRDSMLERVSDMMEKELILVGATAVEDKLQKGVPQCIDNLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITTPVSDSVTSDVKQFFCLTPQAIKDNISNQLTNASQMIKLEKDPHAAFAIIIDGKTLTYTLEDDMKHQFLALAVDCASVICCRVSPKQKALVTRLVKQGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFAIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTIFYFEAFTGFSGQSVYDDWYMILFNVVLTSLPVISLGVFEQDVPSEVCLQFPALYQQGPRNLFFDWYRILGWMGNGLYSSLIIFFLIVTIFYDQAFRGDGQVADMAVVGTTMFTCIVWAVNCQIALTMSHFTWIQHLFVWGSIATWYIFLMLYGMLSPEYSKSAYQILAEALGSAPIYWITTILVTVTCNLPYFVHISFQRCFHPMDHHIIQEIKYYKKDIEDQHMWTRERSKARQETKIGFTARVEAKIRQLKGRLQKKQSALTISTPS* 1232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00450 1231 SFLD p-type atpase 405 939 IPR044492 -
Lapu10g00450 1231 Gene3D - 432 459 IPR023299 GO:0000166
Lapu10g00450 1231 Gene3D - 113 288 - -
Lapu10g00450 1231 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 36 1190 - -
Lapu10g00450 1231 FunFam Phospholipid-transporting ATPase 591 722 - -
Lapu10g00450 1231 Pfam Phospholipid-translocating P-type ATPase C-terminal 916 1166 IPR032630 -
Lapu10g00450 1231 NCBIfam HAD-IC family P-type ATPase 858 969 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lapu10g00450 1231 Gene3D - 724 928 IPR023214 -
Lapu10g00450 1231 Pfam Cation transport ATPase (P-type) 546 651 - -
Lapu10g00450 1231 SUPERFAMILY Calcium ATPase, transmembrane domain M 55 1164 IPR023298 -
Lapu10g00450 1231 Gene3D - 419 431 IPR023214 -
Lapu10g00450 1231 Pfam Phospholipid-translocating ATPase N-terminal 42 109 IPR032631 -
Lapu10g00450 1231 PRINTS P-type cation-transporting ATPase superfamily signature 422 436 - -
Lapu10g00450 1231 PRINTS P-type cation-transporting ATPase superfamily signature 888 907 - -
Lapu10g00450 1231 FunFam Phospholipid-transporting ATPase 724 928 - -
Lapu10g00450 1231 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 523 686 IPR023299 GO:0000166
Lapu10g00450 1231 CDD P-type_ATPase_APLT_Dnf-like 59 1047 - -
Lapu10g00450 1231 SUPERFAMILY HAD-like 417 943 IPR036412 -
Lapu10g00450 1231 Gene3D - 592 723 IPR023299 GO:0000166
Lapu10g00450 1231 SFLD C1.7: P-type atpase like 405 939 - -
Lapu10g00450 1231 FunFam Phospholipid-transporting ATPase 118 288 - -
Lapu10g00450 1231 SUPERFAMILY Calcium ATPase, transduction domain A 146 286 IPR008250 -
Lapu10g00450 1231 Coils Coil 1204 1224 - -
Lapu10g00450 1231 NCBIfam phospholipid-translocating P-type ATPase 57 1174 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Lapu10g00450 1231 ProSitePatterns E1-E2 ATPases phosphorylation site. 424 430 IPR018303 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00450 Lapu-Chr10 6878089 6885331 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00450 1 1226 Primary Pumps ATPases AT1G17500 75.061 0.0 1944
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00450 K01530 - gmx:100784621 2324.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00254 5 2086774 2094092 Lapu10g00450 10 6878089 6885331 PCT