Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00449 ATGGAAACTCGAGTTGGGAACAAGTTCCGTCTCGGTCGGAAAATTGGCAGCGGATCGTTCGGGGAGATCTATCTCGGAACTAATGTTCAGACGAATGAAGAGGTTGCGATTAAGCTTGAAAGTGTCAAAACCAAGCACCCTCAACTGTTGTATGAATCAAAGCTGTATAAAATACTGCAAGGAGGAAATGGGATTCCGAATGTGAAATGGTACGGTGTTGAAGGAGAATACAATGTGCTCGTGATGGATTTACTTGGCCCTAGTCTTGAGGATTTGTTCAACTTCTGTAGTCGGAAATTGTCTCTCAAAACTGTTCTTATGCTTGCTGATCAGATGATAAATAGAGTTGAATTTGTTCATTCCAAATCATTTTTACATCGGGACATCAAGCCAGACAACTTCCTCATGGGTTTAGGGAGGCGTGCAAATCAAGTGTATATCATTGACTTTGGCCTTGCTAAGAAATATAGAGACACCACTACACATCAACATATCCCTTACAGAGAGAACAAGAATTTGACAGGAACTGCTAGGTATGCTAGTATGAATACTCATCTAGGAATTGAGCAAAGCCGCAGGGATGATTTAGAGTCACTTGGATATGTTCTTATGTACTTTTTAAGAGGAAGTCTGCCTTGGCAGGGATTGAAAGCTGGTACTAAGAAGCAGAAGTATGAGAAGATTAGTGAGAAGAAAGTTTCTACTTCTATTGAGTCTCTCTGTCGTGGCTATCCCTCAGAATTTGCTTCATACTTCCATTACTGCCGGTCACTGAGGTTTGATGACAAACCAGATTATGCTTATTTGAAAAGACTTCTGCGTGACCTTTTCATTCGTGAAGGGTTCCAGTTTGATTATGTCTTCGATTGGACCATTTTGAAATATCAGCAATCTCAAAGTGCCACTGCTCCTGCCCGTGCCATTGGTCCTGCTGCTGGACCAAGTTCAGGCGTGCCACCACTGGCTGCAAATACTGATGGACAGTTAGGTGGAGAGGATGGTAGGCATAATAATTGGTCTTCATCAGATCCTACTCGTAGGAGAAACCCTGTACCTTTTGCTAATGATGGAGTGTTATCTAGACAAAAGGGCCCAGTTACATATGACTCAACTCTGTCCAAGGATGTTATGTTGTCAAGTTCTAATTTTTTCCGGCCAAATGGATCTGCAAGGCGAGGTGCTGTCTCAGGCAGCCGAGAATCCCGTGATGTAGTTGTGGGCAGTGAGACTGAGGCTTCTCGTCCTCTGACTCTGGATTCAAGTCAGGGAGCACTTCGTAAAATGTCTGTCCCTGGTGCTCAGAGAAGTTCAGCGATCATGTCATCTGAGCACAACCGTACATCCTCTGGCAGAAACACATCGAACATAAAGAATTTGGAGACAACTCTTAAGGGTATCGAGAGCCTGCATTTCAATGAAGAGAGGGTACATTATTAG 1437 0.4342 METRVGNKFRLGRKIGSGSFGEIYLGTNVQTNEEVAIKLESVKTKHPQLLYESKLYKILQGGNGIPNVKWYGVEGEYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTTTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIESLCRGYPSEFASYFHYCRSLRFDDKPDYAYLKRLLRDLFIREGFQFDYVFDWTILKYQQSQSATAPARAIGPAAGPSSGVPPLAANTDGQLGGEDGRHNNWSSSDPTRRRNPVPFANDGVLSRQKGPVTYDSTLSKDVMLSSSNFFRPNGSARRGAVSGSRESRDVVVGSETEASRPLTLDSSQGALRKMSVPGAQRSSAIMSSEHNRTSSGRNTSNIKNLETTLKGIESLHFNEERVHY* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00449 478 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Lapu10g00449 478 Gene3D Transferase(Phosphotransferase) domain 1 1 309 - -
Lapu10g00449 478 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Lapu10g00449 478 CDD STKc_CK1_delta_epsilon 8 282 - -
Lapu10g00449 478 MobiDBLite consensus disorder prediction 334 348 - -
Lapu10g00449 478 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00449 478 MobiDBLite consensus disorder prediction 380 414 - -
Lapu10g00449 478 FunFam Putative Casein kinase I 1 85 - -
Lapu10g00449 478 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00449 478 MobiDBLite consensus disorder prediction 306 366 - -
Lapu10g00449 478 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00449 478 MobiDBLite consensus disorder prediction 434 456 - -
Lapu10g00449 478 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Lapu10g00449 478 PANTHER CASEIN KINASE-RELATED 8 407 - -
Lapu10g00449 478 MobiDBLite consensus disorder prediction 430 456 - -
Lapu10g00449 478 FunFam Casein kinase I isoform delta-like 1 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00449 Lapu-Chr10 6870971 6876104 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00449 7 214 CBL-interacting serine-threonine protein kinases AT5G58380 27.660 1.70e-12 67.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Lapu10g00449 Pkinase 4e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00449 K02218 - gmx:100787808 865.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00255 5 2096292 2100396 Lapu10g00449 10 6870971 6876104 PCT