Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00445 ATGATCAAGATGTCAAAAACCCTCCGAGCAAAAACATCAGGTTCCTCCAAATTTAGAAGGGCATTAAGTACAAGGTTGAGGAGGCGTGTTAGTCATGGGAAGCTTGAAAAGGTACAAAACTGTTACAAAATAATAAAGGATGTATCCTCAGGGACAAAATCACCTCCACCAAAACCAAATGACGTTAGTCTGCCACAGCTACAACCACAACGGGTATCCCCAGCTTCTGTCTTTACGGCATCTAATGAGACAATAAAGGAAGCTGCGGATACTGCAGCCTACAGAGTTGCTGATGCTGAAAGTAAATCATATTTGGCTTCGGAAGCAGTAAAGGAGGCAGAAAAAGTATCATTGCTGGTTGAACATAGTGATTCAATGTTGCAGCCAGCAAAAGACATATATGAACAATGTCCCGTGGTGAAATTATCCTCTTGGCTTAAGATGGTCAACAAAAAGGTCTATAAATAG 468 0.4124 MIKMSKTLRAKTSGSSKFRRALSTRLRRRVSHGKLEKVQNCYKIIKDVSSGTKSPPPKPNDVSLPQLQPQRVSPASVFTASNETIKEAADTAAYRVADAESKSYLASEAVKEAEKVSLLVEHSDSMLQPAKDIYEQCPVVKLSSWLKMVNKKVYK* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00445 155 MobiDBLite consensus disorder prediction 48 70 - -
Lapu10g00445 155 PANTHER SINGLE MYB HISTONE 4 16 141 IPR044597 GO:0003691
Lapu10g00445 155 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00445 Lapu-Chr10 6854667 6858040 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00445 18 137 Single Myb Histone (SMH) Gene Family AT1G72740 41.667 8.89e-17 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00445 K09422 - gmx:780537 167.548