Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00428 ATGCTTACCCCTGATGTTAGTGATGTACCCAAACAAGGTCGTCCACCAACTGAAGAAGAATTGCATCAATTCTTTCTTCCCTTCAGAGGATTTTGTGCAAGGAAAGGGATCGCAACGAAGGAATTGGTCTTGCATGACCTTGATGTTCCAAATGCACTCATTGCTTTCGTTGCTGAAAATGGCATAAACACCATCGTCGTTGGTGCTGCTACTTCTTCTTGGACTACTCTTATAAGGAGATTTAGTAAAGATGATGTGTCAACTAGTTTGGCAAAATTTTTACCAGATACTTGCAGTTTATATGTTATATCAAAAGGAAAAGTACAACATATTCGACCATCTGGTCATCATGCTTATCATCAACATATGGAAGTCACACCAACTAGATCTGTAAAAGACGTAGTCACTCTTTTGGAAAATGATCCATTGGTTCATCCTCGTAAGAATCTTGCTAATAACCAAGTGGCTTTCGAAGATACAGATAGGAACCTAATGAAAGATGCAATTGGGCGACAATCTAGTAAACTTTGGGAATATTTGCATGAAATGAAAGATGTTACACCAACAACACCATTTAAGTTCCATGAATATACTGATTCTCCAAAAGGTCCAATTGATTACCCCTCATCACAAAGTTCATCTGTGAACAATTCTCCTGGAAATAGTGATAGCACAGGGCAATCACTTGGTCCCCCTTTGACTGATAAGTCAAATGGAAACCATGAAGTTGTTGTGAACTCAAACGTAAACTTCGAGATGGAAATGAGGAAATTGAAATTAGAATTGCAGAAAACTACAGAAAAGTATGGTATGGCTTGCAAAGAAGCTGTTTTAGCCACACAAAAGGCAATGGAGCTTGAAAAGTCTAGGCAAGAAAAGGAACGTGATGTAGAGGAAGCAAAGCTTGCCCAAGTGACTGCATTAGCTTTAGCAGAGATAGAAAGACAAAAAGCCAAAGTGGCTATAGAGTCAGCAGAAATGTCAGAACGCCTAGCAAAAATGGAAGCTAGAAAGAGAAAGGAAGTCGAATTAAAAGCCAAGCGTGAGGAAGAAGAGACTAATAAAGCTATGCGTGAAGTTGTATGCAATAGTATTCCCTATAGACGATATAAAATTGAAGAAATTGAAGTTGCAACAAATAAATTCGACAATGCTCTGAAAATTGGTGAAGGTGGATATGGACCTGTCTTTAAAGGAGTGCTTGATCACACTATTGTAGCTATTAAAGCTGCGAGACCAGATATAGCCTACGCAGAAAAGCAATTTCAACAAGAGGTCATTGTCTTAAGTACCATAAGACATCCAAGTATGGTGCTTCTCTTAGGAGCATGTCCAGATTTTGGTTGCCTTGTATACGAATACATGGTAAATGGAAGCTTAGAAGATCGTCTCTTCCAAAAAGACAACACTCCTCCAATCCCATGGAAAACACGTTTCAAAATAGCATCTGAGATTGCCACTGGCCTTCTTTTTCTTCATCAGAGAAAGCCTGAACCCCTGGTGCACCGTGACTTGAAACCAGCAAACATCCTTTTAGACAAGAACTATGTGAGCAAGATTAGTGATGTTGGTTTAGCACGACTTGTTCCCCCTTCAGTGGCTAACAAAACCACACAATATCGTTTGACTGGTGCAGCTGGAACATTTTGTTACATCGATCCTGAGTATCAACAAACAGGATTGTTGGGTGTGAAATCAGACATATATTCTTTAGGAATGGTGTTGCTACAGATTATTACAGGAAAATCTCCAATGGGCTTGTCACACTTGGTTGAGAGAGCTCTTTCGTCAAATACTTTAAGTGAGGTGCTTGATCCAAATGTTACAGATTGGCCTATGGAAGAGACTTCATCATTTGCTAAGTTGGCCTTAAAGTGTTGTGAGTTGAGAAAACGTGATAGACCAGATCTTGGTACTGTGGTCTTGCCCGAGTTAAATAGAATATCGAAGTTATGGGACTATGAGCAGATACATTCCCTACGAAATTATCACATGGCTTGA 2001 0.3953 MLTPDVSDVPKQGRPPTEEELHQFFLPFRGFCARKGIATKELVLHDLDVPNALIAFVAENGINTIVVGAATSSWTTLIRRFSKDDVSTSLAKFLPDTCSLYVISKGKVQHIRPSGHHAYHQHMEVTPTRSVKDVVTLLENDPLVHPRKNLANNQVAFEDTDRNLMKDAIGRQSSKLWEYLHEMKDVTPTTPFKFHEYTDSPKGPIDYPSSQSSSVNNSPGNSDSTGQSLGPPLTDKSNGNHEVVVNSNVNFEMEMRKLKLELQKTTEKYGMACKEAVLATQKAMELEKSRQEKERDVEEAKLAQVTALALAEIERQKAKVAIESAEMSERLAKMEARKRKEVELKAKREEEETNKAMREVVCNSIPYRRYKIEEIEVATNKFDNALKIGEGGYGPVFKGVLDHTIVAIKAARPDIAYAEKQFQQEVIVLSTIRHPSMVLLLGACPDFGCLVYEYMVNGSLEDRLFQKDNTPPIPWKTRFKIASEIATGLLFLHQRKPEPLVHRDLKPANILLDKNYVSKISDVGLARLVPPSVANKTTQYRLTGAAGTFCYIDPEYQQTGLLGVKSDIYSLGMVLLQIITGKSPMGLSHLVERALSSNTLSEVLDPNVTDWPMEETSSFAKLALKCCELRKRDRPDLGTVVLPELNRISKLWDYEQIHSLRNYHMA* 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00428 666 ProSitePatterns Serine/Threonine protein kinases active-site signature. 500 512 IPR008271 GO:0004672|GO:0006468
Lapu10g00428 666 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 354 454 - -
Lapu10g00428 666 Gene3D Transferase(Phosphotransferase) domain 1 455 661 - -
Lapu10g00428 666 Coils Coil 276 303 - -
Lapu10g00428 666 Coils Coil 308 330 - -
Lapu10g00428 666 SMART serkin_6 382 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00428 666 FunFam Os07g0541700 protein 455 545 - -
Lapu10g00428 666 PANTHER OS02G0152300 PROTEIN 16 651 - -
Lapu10g00428 666 SUPERFAMILY Protein kinase-like (PK-like) 359 641 IPR011009 -
Lapu10g00428 666 MobiDBLite consensus disorder prediction 204 241 - -
Lapu10g00428 666 Pfam Protein kinase domain 386 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00428 666 Coils Coil 248 268 - -
Lapu10g00428 666 ProSiteProfiles Protein kinase domain profile. 382 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00428 666 Coils Coil 332 359 - -
Lapu10g00428 666 MobiDBLite consensus disorder prediction 190 241 - -
Lapu10g00428 666 Gene3D Phosphorylase Kinase; domain 1 361 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00428 Lapu-Chr10 6694075 6698039 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00428 41 651 Receptor kinase-like Gene Family AT5G12000 49.841 0.0 567
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Lapu10g00428 Pkinase 5.2e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00428 - - gmx:100799611 993.03