Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00424 ATGAGCATGAGTATGGCAGAGGAAGAATCTAGTGAGGAGGTTCATGTTCCGGGCGAGATTGACTGGCAAATGCTTGATAAATCCAAGTTCTTCTTCCTTGGTGCTGCTCTTTTCTCTGGGGTTTCTGCAACCCTTTACCCTGTTGTTGTGTTGAAGACTAGGCAGCAAGTGGCTCAGTCCCAAGTTTCGTGCATCAACACTGCATTTTCATTGATTAGGGGTGAGGGTTTTAGAGCATTGTACCGTGGGTTTGGGACTTCTTTGATGGGTACAATCCCTGCTAGGGCTCTTTACATGGCTGCATTAGAGGTTACCAAAAGCAATGTGGGCTCGGCCACTGTTAGATTTGGTCTTGCTGAACCCACTGCTTCTGCAGTTGCCAATGCAGCTGCTGGTTTGAGTGCGGCCATGGCAGCTCAGCTTGTGTGGACCCCTGTTGATGTTGTAAGCCAGAGGTTGATGGTTCAAGGTTGTTGTGATTCTGGCAATCCTAAGGCTTCGGCATTTCGATACATCAATGGCATTGATGCCTTCAGGAAAATATTGAGTAATGATGGTCTCAGGGGCTTGTATAGGGGTTTTGGGATCTCAATTTTGACCTATGCCCCTTCAAATGCAGTTTGGTGGGCTTCATATTCTGTTGCACAAAGGATGGTGTGGGGTGGAGTTGGGTACTACTTGTGCAAGGGCAATGATAATGCAACTAATAGTGCTTTGAGGCCTGATACAAAAACTATGATGGCAGTTCAGGGAGTCAGTGCAGCAGTGGCTGGTGGCATGTCTGCTTTGATCACCATGCCACTGGATACCATCAAGACAAGACTGCAGGTCTTGGATGGCGACGAGAACGGCCGTCGTGGACCCACAGTTATGCAGACAGTGAGGAGTCTGGTCAGGGAAGGTGGTTGGATGGCTTGTTATAGAGGATTGGGGCCTAGGTGGGCATCAATGTCAATGTCTGCAACAACAATGATCACTACTTATGAGTTCCTCAAACGGCTCTCCGCGAAGAACCAAGAGGTTTTAACATGA 1032 0.4816 MSMSMAEEESSEEVHVPGEIDWQMLDKSKFFFLGAALFSGVSATLYPVVVLKTRQQVAQSQVSCINTAFSLIRGEGFRALYRGFGTSLMGTIPARALYMAALEVTKSNVGSATVRFGLAEPTASAVANAAAGLSAAMAAQLVWTPVDVVSQRLMVQGCCDSGNPKASAFRYINGIDAFRKILSNDGLRGLYRGFGISILTYAPSNAVWWASYSVAQRMVWGGVGYYLCKGNDNATNSALRPDTKTMMAVQGVSAAVAGGMSALITMPLDTIKTRLQVLDGDENGRRGPTVMQTVRSLVREGGWMACYRGLGPRWASMSMSATTMITTYEFLKRLSAKNQEVLT* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00424 343 PRINTS Mitochondrial carrier protein signature 191 209 IPR002067 GO:0055085
Lapu10g00424 343 PRINTS Mitochondrial carrier protein signature 83 103 IPR002067 GO:0055085
Lapu10g00424 343 PRINTS Mitochondrial carrier protein signature 31 44 IPR002067 GO:0055085
Lapu10g00424 343 PRINTS Mitochondrial carrier protein signature 254 276 IPR002067 GO:0055085
Lapu10g00424 343 ProSiteProfiles Solute carrier (Solcar) repeat profile. 245 334 IPR018108 -
Lapu10g00424 343 Pfam Mitochondrial carrier protein 37 108 IPR018108 -
Lapu10g00424 343 Pfam Mitochondrial carrier protein 123 219 IPR018108 -
Lapu10g00424 343 Pfam Mitochondrial carrier protein 248 338 IPR018108 -
Lapu10g00424 343 Gene3D Mitochondrial carrier domain 29 341 IPR023395 -
Lapu10g00424 343 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 108 IPR018108 -
Lapu10g00424 343 SUPERFAMILY Mitochondrial carrier 23 331 IPR023395 -
Lapu10g00424 343 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 218 IPR018108 -
Lapu10g00424 343 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 7 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00424 Lapu-Chr10 6620305 6622226 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00424 1 340 Chloroplast and Mitochondria Gene Families AT1G72820 74.493 0.0 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00424 K15121 - gmx:100784616 592.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00424 10 6620305 6622226 Lapu10g00424 10 6620305 6622226 ECH