Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00412 ATGACATATTCTTATTCTTTCGGAGTTTTTGATAAAATCAAACGTGTTGTATTTGTTTGTCTCTTGCTGGCAGCGATAGACAATAATAATAATTCTTCATATCCAGTGACAGATTTTGCTTATCCCAATGACTCCCCTCAGATAAAGTACGATGTGTTTGTTAGCTTTAGAGGCACAGATATCCGGCAAGATTTCCTTAGCCATTTGGTTGAGGAGTTTTCTCGAAGGCATATTGATGCGTTTGTGGATAACAAGATTGTCAAAGGAGATGGACTGTCTGAAGCACTTACTCGTGCAATTGAAGGATCGTCAATTTCATTGATTATATTTTCAAAAGGTTATGCTTCTTCACATTGGTGTTTGTCAGAACTTGTGAAAATTGTTGAGTGTAGAAAAAAAAATGGCCAGATTGTGCTACCTATCTTCTACAAAGTGGATCCTTCACATGTACGAAATCAGAAGGGGACTTATGAAGATGCCTTCGCTAAACATGAAGTAAGACATAGTTTGACCACTATGCAAACCTGGAGATCTGCTTTGACTGAATCTGCTAATCTATCAGGATTTCATTCATCAACTTTTCGGGACGAAGCTGAGTTTATTAAAGAGATAGTTAAATGTGTGGTGATGAGGTTGAATCAAGTGCATCAAGTTAACTCCAAAGGGCTTGTTGGAGTTGGTAAACGAATTGCACATGTTGAATCACTGCTACAATCAGAAGGGCCTGGTGTACGTATTGTTGGAATATGGGGCATGGGTGGCATTGGTAAAACAACCATTGCACAAGAAGTATATAATAAGCTGTGTTTTGAATATGAAGGTTGTTGTTTTTTGGCTAACATAAGAGAAGAATCGGGAAGACATGGAATAATCTCTTTAAAGAAGAAGCTTTTCTCAACATTATTAGGAGGAGAAGATTTAAAAATTGACACACCTAACGGATTGCCTCAATATATTGAGAGAAGGCTTCGTCGTATGAAAGTTATCATCATTCTTGATGATGTCAATGATTCAGAACAACTGGAAATTTTAGCTGGAACATATGATTGGTTTGGATCAGGTAGCAGAATCATCATAACAACCAGAGATAAGCAGGTACTTGCTAATGAGTTTGCTTGTATATATGAGGTTGAGGCATTAAACTTTGATGAATCCTTAAGGCTTTTCAATTTGAATGCCTTTAAGCAAAATCATCTTGAAAGTGAGTACCATGAGCTTTCAAAGAAAGTGGTCAATTATGCGAAAGGCATTCCACTAGTTCTTAAAGTTTTGGGTCACCTTCTTCATGGAAAAGATAAAGAAACTTGGGAAAGCCAATTAGAAAGACTCAAAAAAGTGCAAAATAGAAAGATCCATGATATCATTAAATTGAGTTACAATGATCTTGATCGGGATGAAAAGAAGATATTTTTAGATATCGCATGCTTTTTCGATGGACTAAATCTGAAAGTAAAGTATATAAACTTTTTATTGAAAGATCATGATTATTCAGTGGTTGCCGGATTAGAAAGATTGAAAGATAAAGCTCTTATTAGTGTTTCTCAAGAAAATGGTGTAACGATGCACAACATTATACAAGAAACAGCTTGGCAGATTGCTCGAGAAGAATCAACTGAAGATCCTAGAAGCCAAATTCGACTACTGGATCCTGAGGACATTTATCAAGTACTAAACTACAATAAGGGTGACGAGGCTATCAGAAGCATTGTAATCAACTTGTCAAGAATCAAACAACTGCAATTAAACCCTCAAGTATTTGCTAGGATGAGCAAACTACACTTTCTAGATTTTTATAGTAAAGGGCCTTGCGGTTGCCTAAGGGGTAAAGGAGGTTTGTATCTTCCCCAAGGGCTTGAATCTTTATCAAATGAACTAAGATATCTTCGTTGGACCCATTATCCTTTGGAATCTTTGCCTTCAAAGTTTTCTGCTGAAAATCTTGTTGAATTGAACTTGCCACATAGCCGACTGAAAAAACTTTGGCAAGAAGCACCGGATCTTGTTAACTTAAGGGTCCTTATACTTCATTCATCAACAAGACTAAAGGAGCTACCGAACTTTTCAAAGGCCACAAATCTTAAAGTGATAGATCTCCGATTTTGTGTAGGGCTGACTAGTGTGCATTCATCAATTCTCTCTCTTAGAAATCTTGAGAAATTGGATCTAGGTGGTTGCATTTCCCTTAGAAGCCTTCGAAGCAATGTCCATTTGCACTCCCTTCGTTATCTCTCCCTCTATGGATGCATGACACTGAAGGATTTCTCAGTGACCTCAGAGAATATGGTAAAGTTGAATTTAGAACTCACCAGTATCAAGAAACTGCCTTCATCATTTGGACTTCAAAGAAAGCTTCAAAAGCTACGTCTGGCATACACTTACATTGACAACTTGCCAACAAGTATCAAGCATCTTACAAGGCTGCGACATCTAGATCTAAGACACTGCAGAGAGCTTCGAACTCTACCAGAGCTTCCCCCATCACTTGAAACACTAGATGCCCGTGAATGTGTATCACTTGAGACTGTAACGTTCCCTCCTACTGCTAGCGAACAGCTGAAGGAAAATAAGAAAAGAGTTGCTTTCTGGAACTGCTTGAAATTGGATGAACATTCTCTCATGGGTATTGAGTTGAATGCACAGATTAACATGATGAAATTTGCACACCAACATTTTTCCCTATTTGGCGATGCTCAAGCTACCTATGTGTATCCTGGAAGTAAAGTTCCAGAGTGGCTGGTGCATAAGACAACACATGATGACTACGTGATCATGGACCTCTCTTCTGTTCTTTCTCCACACTCCTCACACGTAGGCTTCATTTTTGGCTTTCTTGTTCCAGAAGTCCCATTTGGGGGTTTGGTTTTGGAATTTAAGATTAGCACTGGTGGTGAAGGTGATGATGATAGCCATCATATCAATGTGTACGTGGATAGACCACGTCGTGGTATTAAATCGGATCATGTGTATCTAATGTACGACCAAACATGTTCTCGCTACCTAAGTAGTCGTGCCAAACATGAGCCAAGGTTGAAAATTAAGGTTGCATTGGCATCGCGAACGCTCACATCCAAGTACGTACCATTACAGCTAAGAGCTTTTGGGATCAGCATAATCAATTCTACAGAATTTCTTAATTTTGTTCAGAAAGTTAAATTTGGTGATAGCATTCCGAACGTCCCAATTTTGTTAAGATTTTTCTGTACTTTCTGCATTGTTGTTTTTGTTGGGACTTTTAATATTTGTATTAGAAGATTAGTGTAG 3261 0.3812 MTYSYSFGVFDKIKRVVFVCLLLAAIDNNNNSSYPVTDFAYPNDSPQIKYDVFVSFRGTDIRQDFLSHLVEEFSRRHIDAFVDNKIVKGDGLSEALTRAIEGSSISLIIFSKGYASSHWCLSELVKIVECRKKNGQIVLPIFYKVDPSHVRNQKGTYEDAFAKHEVRHSLTTMQTWRSALTESANLSGFHSSTFRDEAEFIKEIVKCVVMRLNQVHQVNSKGLVGVGKRIAHVESLLQSEGPGVRIVGIWGMGGIGKTTIAQEVYNKLCFEYEGCCFLANIREESGRHGIISLKKKLFSTLLGGEDLKIDTPNGLPQYIERRLRRMKVIIILDDVNDSEQLEILAGTYDWFGSGSRIIITTRDKQVLANEFACIYEVEALNFDESLRLFNLNAFKQNHLESEYHELSKKVVNYAKGIPLVLKVLGHLLHGKDKETWESQLERLKKVQNRKIHDIIKLSYNDLDRDEKKIFLDIACFFDGLNLKVKYINFLLKDHDYSVVAGLERLKDKALISVSQENGVTMHNIIQETAWQIAREESTEDPRSQIRLLDPEDIYQVLNYNKGDEAIRSIVINLSRIKQLQLNPQVFARMSKLHFLDFYSKGPCGCLRGKGGLYLPQGLESLSNELRYLRWTHYPLESLPSKFSAENLVELNLPHSRLKKLWQEAPDLVNLRVLILHSSTRLKELPNFSKATNLKVIDLRFCVGLTSVHSSILSLRNLEKLDLGGCISLRSLRSNVHLHSLRYLSLYGCMTLKDFSVTSENMVKLNLELTSIKKLPSSFGLQRKLQKLRLAYTYIDNLPTSIKHLTRLRHLDLRHCRELRTLPELPPSLETLDARECVSLETVTFPPTASEQLKENKKRVAFWNCLKLDEHSLMGIELNAQINMMKFAHQHFSLFGDAQATYVYPGSKVPEWLVHKTTHDDYVIMDLSSVLSPHSSHVGFIFGFLVPEVPFGGLVLEFKISTGGEGDDDSHHINVYVDRPRRGIKSDHVYLMYDQTCSRYLSSRAKHEPRLKIKVALASRTLTSKYVPLQLRAFGISIINSTEFLNFVQKVKFGDSIPNVPILLRFFCTFCIVVFVGTFNICIRRLV* 1087
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00412 1086 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 50 838 IPR044974 GO:0006952
Lapu10g00412 1086 Gene3D Ribonuclease Inhibitor 556 752 IPR032675 -
Lapu10g00412 1086 SMART till_3 49 186 IPR000157 GO:0007165
Lapu10g00412 1086 PRINTS Disease resistance protein signature 414 428 - -
Lapu10g00412 1086 PRINTS Disease resistance protein signature 322 336 - -
Lapu10g00412 1086 PRINTS Disease resistance protein signature 802 818 - -
Lapu10g00412 1086 PRINTS Disease resistance protein signature 246 261 - -
Lapu10g00412 1086 Pfam TIR domain 49 218 IPR000157 GO:0007165
Lapu10g00412 1086 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 212 473 IPR027417 -
Lapu10g00412 1086 SUPERFAMILY L domain-like 569 840 - -
Lapu10g00412 1086 Pfam Leucine Rich Repeat 646 663 IPR011713 -
Lapu10g00412 1086 FunFam Disease resistance protein (TIR-NBS-LRR class) 46 214 - -
Lapu10g00412 1086 SUPERFAMILY "Winged helix" DNA-binding domain 450 557 IPR036390 -
Lapu10g00412 1086 Gene3D - 379 463 IPR042197 -
Lapu10g00412 1086 Gene3D - 47 210 IPR035897 -
Lapu10g00412 1086 Pfam NB-ARC domain 234 460 IPR002182 GO:0043531
Lapu10g00412 1086 SUPERFAMILY Toll/Interleukin receptor TIR domain 44 189 IPR035897 -
Lapu10g00412 1086 ProSiteProfiles TIR domain profile. 48 212 IPR000157 GO:0007165
Lapu10g00412 1086 Gene3D - 211 372 IPR027417 -
Lapu10g00412 1086 Gene3D Ribonuclease Inhibitor 753 874 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00412 Lapu-Chr10 6495649 6499531 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00412 41 823 WRKY Transcription Factor Family AT4G12020 34.131 1.20e-110 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00412 - - gmx:100802823 1746.1