Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00405 ATGAAGCTTTCCTTTTCCGTGCCTTCATCGAAACCCCAGTCGAAGCCCAAACCGGTCAATACCTTCGACGACCCTTCCGCCGCCCAAAACGACGCTGGCAAATCCAAACACCTGATCACCGAATTCGATCCTTCCAAACCCGCTCCCTCCCTCGCCCCCAAAACCCTAATTCCTCCCATCCAAAACCAATGGAAACCCTTCAAGAAGATGAAGAACCTCCACCTCCCCACCGCCGACCCCGAATCCGAAGCCCTCACATTCGAACTCCACGCCGCCGACGAGCAACCGGACTCCGACGTCTCCTACGGCCTCAACCTCCGCGCCGACAAAAAAAGTGACCAAAACAACGGTACCTCACTTCCGCCGCCGCCGCGCCGCGTTCCGGCGGAGAGCACGATGCTGCAGAAGCTGAAGGACGATCTGCAGAGGCTACCGGAGGACCAGGGGTTCGACGAATTCAAGGATGTTCCAGTTGAAGGTTTTGGCGCAGCGCTGCTCGCTGGGTACGGTTGGAAGGAAGGGATGGGGATTGGGAAGAACGCGAAGGAGGACGTGAAGGTTGTGGAGATCAAACGGAGGACTGCCAAGGAAGGATTGGGGTTTGTTGGTGATGCTCCTGCTGCGCTGGTTCGGAGCAACAATGACAAGGAAAACAAGAACAAGGAAAAGGACAGGAATGAGAAGGAGAAGGTTGTTAGGATTGTTGGGGGAAGAGATGCTGGGCAGAAGGGTAATGTTGTGTCTAGGATTGGGGATGATTATCTTGTTTTGGAGCTATCCAGGAGCGGAGAGAAGGTGAAGGTGAAGGTGGGGGATGTTGCTGAACTGGGTTCTAAGGAGGAAGAGAGATGTTTGAGGAAATTGAAGGAGTCAAAGTCTCAGCGTGAGGATAGAGGGCCGAAAAGGAAGCACGACAGGGATGAGGTGGAGGAGAATAGAGTGGATGTTAGTCGGAGAGAGGAGAGAAGAGGGATGGGTCGCAGGGATGCAGTTGAGGAGAAGAGAGTGGATGGTGGTAGGAGAGAAGAGAGGAGAGTGGTGGATCATAGGAAGGTTTCTTGGCTTACTAGTCACATTCGGGTGAGGGTGATTAGCAGGGATTTGAAAGGAGGGCGGTTATATTTGAAGAAGGGGGAAGTTCTGGATGTTGTTGGGCCTACCACTTGTGATGTATCTATGGATGAGAGCAGGGAGATTGTTCAAGGGGTGTCCCAAGATTTTCTGGAGACTGCAATTCCGAAACGTGGGGGGCCTGTGCTTGTGTTGGCTGGTAAATACAAGGGTGTATTTGGGAGTCTGGTGGAGAGGGATTTGGACCGGGAAATGGCCATTGTTAGGGATGCTGATACGCATGAGCTGCTCAACGTGAAGCTTGAACAAATTGCGGAGTATATAGGGGACCCAAGCTTGTTAGGACATTGA 1422 0.5281 MKLSFSVPSSKPQSKPKPVNTFDDPSAAQNDAGKSKHLITEFDPSKPAPSLAPKTLIPPIQNQWKPFKKMKNLHLPTADPESEALTFELHAADEQPDSDVSYGLNLRADKKSDQNNGTSLPPPPRRVPAESTMLQKLKDDLQRLPEDQGFDEFKDVPVEGFGAALLAGYGWKEGMGIGKNAKEDVKVVEIKRRTAKEGLGFVGDAPAALVRSNNDKENKNKEKDRNEKEKVVRIVGGRDAGQKGNVVSRIGDDYLVLELSRSGEKVKVKVGDVAELGSKEEERCLRKLKESKSQREDRGPKRKHDRDEVEENRVDVSRREERRGMGRRDAVEEKRVDGGRREERRVVDHRKVSWLTSHIRVRVISRDLKGGRLYLKKGEVLDVVGPTTCDVSMDESREIVQGVSQDFLETAIPKRGGPVLVLAGKYKGVFGSLVERDLDREMAIVRDADTHELLNVKLEQIAEYIGDPSLLGH* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00405 473 Pfam G-patch domain 145 201 IPR026822 -
Lapu10g00405 473 MobiDBLite consensus disorder prediction 1 63 - -
Lapu10g00405 473 ProSiteProfiles G-patch domain profile. 158 204 IPR000467 GO:0003676
Lapu10g00405 473 Gene3D - 358 412 - -
Lapu10g00405 473 PANTHER G PATCH AND KOW-CONTAINING 1 469 IPR045166 GO:0000398
Lapu10g00405 473 MobiDBLite consensus disorder prediction 287 340 - -
Lapu10g00405 473 SMART G-patch_5 156 202 IPR000467 GO:0003676
Lapu10g00405 473 MobiDBLite consensus disorder prediction 1 28 - -
Lapu10g00405 473 MobiDBLite consensus disorder prediction 88 129 - -
Lapu10g00405 473 Coils Coil 209 229 - -
Lapu10g00405 473 SMART kow_9 412 439 IPR005824 -
Lapu10g00405 473 SMART kow_9 225 252 IPR005824 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00405 349 446 C2H2 Transcription Factor Family AT1G55460 32.653 1.75e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00405 K13101 - gmx:100784983 672.93