Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00400 ATGGGAAGAAGTCCTTGTTGTTCTAAAGAAGGTTTGAACAAAGGAGCATGGACAGCTCTGGAAGATAAAATTCTGACAGAATACATTAACATCCATGGCGAAGGAAAATGGAGACACCTGCCCAAAAGAGCAGCAGTTCAGCATGATCAAAACGTGAAGAACCAAGAGTGGCACTACGATAAGGGTTCGTGTCTTGTTCAGACTAAAGCAACAAGGTGGACTAAGGTCACAGTCACTAATGAAATTAGTCAACATAACGAAGTCAATAAGAGCAATGTTGGTGATCATAACAAAATGAAGGCATTTCTAGTGTCTCCGTCTTCAGAGAGTAACAATGATCCAGTGTTGAATTTCATGGAAAATCTTGAGATGGATGGCAATTTCTTCTCGGAGCTACTCAAGATGGATTTGCCTGAATCATCTTGTCAAGGAAATAAGATACTTGAAGATAATGATAACCCTAGTTCGGTTGATAAAGGGTATTTATCTCCAAAGTCATCCTGTGATACCACCCACTTTCCTTGGGGTGATTCACTTTATGACCCAAATTTTGATTTTCTACCACTGACAACTTTCATGGAGTCCGGATTTGATTGGCTATGA 603 0.3997 MGRSPCCSKEGLNKGAWTALEDKILTEYINIHGEGKWRHLPKRAAVQHDQNVKNQEWHYDKGSCLVQTKATRWTKVTVTNEISQHNEVNKSNVGDHNKMKAFLVSPSSESNNDPVLNFMENLEMDGNFFSELLKMDLPESSCQGNKILEDNDNPSSVDKGYLSPKSSCDTTHFPWGDSLYDPNFDFLPLTTFMESGFDWL* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00400 200 SUPERFAMILY Homeodomain-like 8 43 IPR009057 -
Lapu10g00400 200 CDD SANT 16 47 IPR001005 -
Lapu10g00400 200 Gene3D - 11 62 - -
Lapu10g00400 200 ProSiteProfiles Myb-like domain profile. 9 55 IPR001005 -
Lapu10g00400 200 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00400 Lapu-Chr10 6370080 6371424 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00400 1 85 MYB Transcription Factor Family AT5G07690 37.755 9.80e-16 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00400 K09422 - gmx:100809225 260.381