Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00381 ATGGCAATGTCTGCACCGATGCTCATTGACCCTGTGGTGATATCGGCACCAGAAACTCAATCAGCGGCTAGCATACTAGTTGCACAAAGTGAGGTTGAATTTGCTGTGTGTGACTGTTGTGGACTAACAGAAGAGTGCACCCCAGCCTATATAGAAAGAATCAGGGAGAGGTACCATGGAAAATGGGTTTGTGGGTTGTGTGCTGAGGCTGTTAAGGATGAAATTGTAAGGTCCGAGAGGCTTGTTAGCACAGAAGAAGCAATGGCAAAGCATATGAACTTCTGCAAAAAGTTCAAGGCATCGGGGCCTCCTCCAAATCCAACAGTGCATTTGATATCAGCTATGAGGCAAATTCTTAGGAGGAGTTTGGATTCTCCTAGAGTAAGGTCCACACCGAATAGTCCAACTAAGACTATCACAGAAATCCATGGTTCTGTGCTTACAAGGTCTGAGAGCTGCTTCCCTACCCTCACTGAAGGGTTGGGATGA 489 0.4642 MAMSAPMLIDPVVISAPETQSAASILVAQSEVEFAVCDCCGLTEECTPAYIERIRERYHGKWVCGLCAEAVKDEIVRSERLVSTEEAMAKHMNFCKKFKASGPPPNPTVHLISAMRQILRRSLDSPRVRSTPNSPTKTITEIHGSVLTRSESCFPTLTEGLG* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00381 162 Pfam Protein of unknown function (DUF1677) 32 121 IPR012876 -
Lapu10g00381 162 PANTHER OS01G0745000 PROTEIN 24 159 IPR012876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00381 Lapu-Chr10 6164545 6166682 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00381 - - gmx:100803697 305.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01983 9 34694083 34694803 Lapu10g00381 10 6164545 6166682 ECH
Lapu10g00381 10 6164545 6166682 Lapu10g00381 10 6164545 6166682 ECH