Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00374 ATGGAGAGCCTCCCGCTCGAGACGGCGGAGAAGATCATTCTGCGGTGGGACTCGACGGCGTCGGAGGACGCCCGCGACAAGATGATATTCTCCGGCGACCGCGACGAGGCGGATCTCTACCTGCAAGCGGTGGACGAAATCCAGAGGTCCCTCTCCGACGTTTCCGTGTCGGAGAAAGTCAACTCCGCCATCCAGATCGCCATGGCCCGCTTAGAAGACGAGTTCCGCAACATCCTCATCTCCCACACCAACCCCTTCGACCCCACCACCGAAGACGAACCCTCCCAAACCCTTGACCCTCCTTCTTCCTCCTCTTCCCCCAAGCACCCTCACAACGACGACAACGACGAAAACGAAGACGTTAGCCAAACCTCTCTCCTCCGTTTCAACAGTGAGGGCGCTGCTTCTTCTGTCACTGGCAGCTACCGCTCCACCAGTAGTATCCGTGAGATCGATCTCATCCCCTCCGACGCCGTCTACGACCTCCGTTGCATCGCCGAACGCATGGTCTCCTCCGGCTACTTGCGCGAGTGCATCCAGGTCTACGGCAGCGTCAGAAAATCTTCCGTCGACGCCAGCTTCCGCAAGCTCGGAATCGAGAAGCTCAGCATCGGCGACGTGCAGCGCCTCGAGTGGGAGCAGCTCGAGAACAAAATCAGACGCTGGATACGAGCCGCGAAGGTCTGCGTCAGAACGCTCTTTGCCAGTGAGAAGAAGCTCTGCGAGCAAATCTTCGATGGAGTTGGAACCGCCATCGATGACGCTTGCTTCATGGAGACTGTGAAAGGCCCTGCCATTCAGCTCTTCAACTTCGCCGAGGCGATTAGTATTAGCCGGAGGTCACCGGAGAAGTTGTTCAAGATTTTGGATTTACATGATGCGTTGACGGAGTTGATGCCGGATATAGATGTTGTGTTTGATTCCAAGTCCTCGGAGTCGATTAGGGTTCAGGCAGCGGAGATTTTGTCGAGGTTGGGGGAGGCTGCAAGGGGGATTTTGTCGGAGTTCGAGAACGCTGTGCTCAGGGAACCCTCTAGGGTTCCTGTTCCCGGTGGGACGATTCACCCTTTGACTCGGTATGTGATGAATTACATAAGTTTGATCTCTGATTACAAGGTTACTTTGAATGAGCTTATAGTGTCTAAGCCCTCCACGGGGTCTCGGTATTCGGGTGATCCTGGGATACCTGATTTGGATTTGAGTGAGTTTGAGGAGAAGACCCCTTTGGATGTGCACTTGATTTGGATTATTGTGATATTGCAATTCAACTTGGATGGGAAGAGTAAGCACTACAAGGATGCGTCTTTGGCTCACTTGTTTGTGATGAACAATGTGCACTACATTGTGCAGAAGGTGAGGGGGAGTCCGGAGTTGCGCGAGATGATTGGGGATGATTATTTGAAGAAGCTCACCGGGAAGTTCCGGCAGGCAGCCACGAGCTACCAGAGGGCAACGTGGGTGAGGGTGTTGTATTGTTTGAGGGATGAGGGGTTGCATGTGAGTGGGGGGTTTTCTTCTGGGGTGTCCAAGAGTGCTCTCAGGGAGAGGTTTAAGGCTTTTAATGCCATGTTTGAAGAGGTTCACAGGACTCAGGCGGTTTGGTTGATACCGGATTCGCAGCTCAGGGAGGAGCTGAGGATATCGATATCAGAGAAGCTGATTCCGGCGTATAGGTCTTTTCTTGGGAGGTTCAGGAGCCACATAGAGAGTGGGAGGCATCCGGAGAATTACATCAAGTACTCTGTTGAGGACCTGGAGGATGCTGTTTTGGACTTTTTTGAAGGGATTCCTGTTTCCCAGCACTTGAGGAGGAGATCTGAATGA 1824 0.5329 MESLPLETAEKIILRWDSTASEDARDKMIFSGDRDEADLYLQAVDEIQRSLSDVSVSEKVNSAIQIAMARLEDEFRNILISHTNPFDPTTEDEPSQTLDPPSSSSSPKHPHNDDNDENEDVSQTSLLRFNSEGAASSVTGSYRSTSSIREIDLIPSDAVYDLRCIAERMVSSGYLRECIQVYGSVRKSSVDASFRKLGIEKLSIGDVQRLEWEQLENKIRRWIRAAKVCVRTLFASEKKLCEQIFDGVGTAIDDACFMETVKGPAIQLFNFAEAISISRRSPEKLFKILDLHDALTELMPDIDVVFDSKSSESIRVQAAEILSRLGEAARGILSEFENAVLREPSRVPVPGGTIHPLTRYVMNYISLISDYKVTLNELIVSKPSTGSRYSGDPGIPDLDLSEFEEKTPLDVHLIWIIVILQFNLDGKSKHYKDASLAHLFVMNNVHYIVQKVRGSPELREMIGDDYLKKLTGKFRQAATSYQRATWVRVLYCLRDEGLHVSGGFSSGVSKSALRERFKAFNAMFEEVHRTQAVWLIPDSQLREELRISISEKLIPAYRSFLGRFRSHIESGRHPENYIKYSVEDLEDAVLDFFEGIPVSQHLRRRSE* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00374 607 Pfam Exo70 exocyst complex subunit 221 589 IPR046364 GO:0000145|GO:0005546|GO:0006887
Lapu10g00374 607 PANTHER EXOCYST COMPLEX PROTEIN EXO70 6 595 IPR004140 GO:0000145|GO:0006887
Lapu10g00374 607 MobiDBLite consensus disorder prediction 82 121 - -
Lapu10g00374 607 MobiDBLite consensus disorder prediction 82 108 - -
Lapu10g00374 607 Gene3D Exocyst complex component Exo70 12 603 - -
Lapu10g00374 607 SUPERFAMILY Cullin repeat-like 34 594 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00374 Lapu-Chr10 6086078 6088551 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00374 6 607 EXO70 exocyst subunit family AT1G72470 70.436 0.0 847
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00374 K07195 - gmx:100808671 1066.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00374 10 6086078 6088551 Lapu10g00374 10 6086078 6088551 ECH