Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00372 ATGTCAAGTTTTCTCAACACCGTGTCCGAAGGCCGGAGGTCTGGCAAGGCACCGGAAAAATCCTCTTTTTCTCAGACTTGCAGTCTCTTGAGCCAGTTCTTGAAGGAGAAACGAGCTTGTGGTGATTCCACCCTTGGAATGGGTGGGAAAATCGAACCTAAAGAAATATGTAGAAAGTGTGTGAAATTGCTTGTGATGAGAATTGCTGATGGGGGTGTTCTTTGTTTGGATTTGGAAATTCCAGCGGGTACGAAGGATTTGTTTGGCAGCCTGCAAAACTCAGATGGGGCTTTGAAACTTAGCGCTTCTGCCATGGATTTTCTTCCCCAGCTTGTGGAAAACCCCTGCATTAAGAAGTCCAATCTTAGATCACCGGTTTCTGAATCTCCTCAAATGACAATATTCTATGCTGGAAAAATGTTGGTATTTGATGCTTTTCCTCCGGAGAAGGCAACAGAGGTGATGGAGTTGGCCACCAAGCTGGCTTCGGACGCTTCCGCTGCAGAAGAAACTCCCGCTAGTGCTCCAGTTACTACAAAAAAATTGGCTGAGGCCAAAGTGCCTCAAACAAACACCTCAGAAACCGCTAAGCCAGGAAGCCAAGGGGTTGGTTCAGATATGAGGTATCCAAGAAGAGCTTCACTTCTAAAATTTCTCGAGAAAAGAAAAGAAAGGGTTAATGCGAGAGGGCCTTACCAAATGAACAATCACAGACCAGAGGGAAGCAGTTCAGGGGGTGATCCTGAAGATCAGTGTTCTAAACAGTTTGACCTTAACTTGTAG 783 0.4572 MSSFLNTVSEGRRSGKAPEKSSFSQTCSLLSQFLKEKRACGDSTLGMGGKIEPKEICRKCVKLLVMRIADGGVLCLDLEIPAGTKDLFGSLQNSDGALKLSASAMDFLPQLVENPCIKKSNLRSPVSESPQMTIFYAGKMLVFDAFPPEKATEVMELATKLASDASAAEETPASAPVTTKKLAEAKVPQTNTSETAKPGSQGVGSDMRYPRRASLLKFLEKRKERVNARGPYQMNNHRPEGSSSGGDPEDQCSKQFDLNL* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00372 260 MobiDBLite consensus disorder prediction 1 21 - -
Lapu10g00372 260 MobiDBLite consensus disorder prediction 184 200 - -
Lapu10g00372 260 MobiDBLite consensus disorder prediction 164 260 - -
Lapu10g00372 260 ProSiteProfiles Tify domain profile. 125 160 IPR010399 -
Lapu10g00372 260 MobiDBLite consensus disorder prediction 213 228 - -
Lapu10g00372 260 Pfam tify domain 128 158 IPR010399 -
Lapu10g00372 260 MobiDBLite consensus disorder prediction 236 260 - -
Lapu10g00372 260 Pfam Jas motif 211 233 IPR018467 -
Lapu10g00372 260 SMART tify_2 125 160 IPR010399 -
Lapu10g00372 260 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 13 243 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00372 Lapu-Chr10 6046826 6050071 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00372 8 234 Tify Gene Family AT1G19180 32.645 1.85e-22 91.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Lapu10g00372 tify 9.3e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00372 K13464 - gmx:100778559 367.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00372 10 6046826 6050071 Lapu10g00372 10 6046826 6050071 ECH