Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00362 ATGGACGACGACGACGAGATCCAGTCGCATCCGTCGCCGGCGAGCGGATCCCCGGTATCGTCTCCGCGGGCGAACGGAAGGATAACGGTAACCGTCGCGGCGCCGGCACCGCAGGCGACGGCGCCGTCTAATAGTTTGGCATTAGCGCTTCCGATACAGCAACCGGCGAAGGGTAACGGTGGAGGAGGCGGCGGCGGCGGTGGAGGGAGGGAGGATTGCTGGAGCGAAGGCGCGACGGCCGTACTGATCGACGCGTGGGGAGAGAGGTACCTTGAACTGAGCAGAGGAAATCTGAAACAGAAGCACTGGAAGGAGGTGGCGGATATCGTGAGCGGCAGAGAGGATTACACGAAGGCGCCGAAGACAGATATTCAGTGCAAAAACCGGATCGACACCGTTAAGAAGAAGTACAAATCGGAGAAGGCGAAGATCGCTGCCGGCGCTACCAGCAAGTGGCCGTTCTTCGACCGGTTGGACAAATTAATCGGTCCAAGCGCCAAGATCCCCGGCGCCGCCGGTGCCTCCGGTACCGCTGGCACCAGCGCTGCCGGAAGCAGTATTTTGCAGCAGCAGAAAGTGCCGTTAGGGATTCCTGTCGGCGTTCGCGATGGTGCGAATCAATATCACCGTCCTCAAAGGCCGGCGCTGCAGCAACAACCGCAGCCGCCGGTTCCGTTAAAGAACCAGAAGATTCAGTTCCGGCGCCGTGGTCCGCCGTTGGATTCCGATTCGGACGAGCGTGGCGCGTCGTCGCCTGCTTCGAGCGACAGTTTTCCGCCGGAGAGTTTCGAGCGGAAGAGGCCGCGGGTGATGAGTTCAAACGCGGGGAAAGGAAGCGAAGGAAGACGGAAGGCGAAGGACTGGGGAAGCGCGGTGAGGGAACTGACGCAGGCGATTCTGAAATTTGGCGAGGCGTATGAACATGCGGAGAGCTCGAAGCTGCAGCAGGTGGTGGAGATGGAGAAGCAGAGGATGAAGTTCGCGAAGGATTTGGAGTTGCAGAGAATGCAGTTTTTCATGAAGACACAATTGGAGATTTCGCAACTCAAGCTTGGAAGAAAAGGTGCTAACCCTAGCAACAATCTCCATAGCACCACCACCAACAATAACAATAACAACAATCATAACAATAATAGTGACAGTGAGTGA 1149 0.5744 MDDDDEIQSHPSPASGSPVSSPRANGRITVTVAAPAPQATAPSNSLALALPIQQPAKGNGGGGGGGGGGREDCWSEGATAVLIDAWGERYLELSRGNLKQKHWKEVADIVSGREDYTKAPKTDIQCKNRIDTVKKKYKSEKAKIAAGATSKWPFFDRLDKLIGPSAKIPGAAGASGTAGTSAAGSSILQQQKVPLGIPVGVRDGANQYHRPQRPALQQQPQPPVPLKNQKIQFRRRGPPLDSDSDERGASSPASSDSFPPESFERKRPRVMSSNAGKGSEGRRKAKDWGSAVRELTQAILKFGEAYEHAESSKLQQVVEMEKQRMKFAKDLELQRMQFFMKTQLEISQLKLGRKGANPSNNLHSTTTNNNNNNNHNNNSDSE* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00362 382 Pfam Myb/SANT-like DNA-binding domain 71 161 IPR044822 -
Lapu10g00362 382 MobiDBLite consensus disorder prediction 10 27 - -
Lapu10g00362 382 MobiDBLite consensus disorder prediction 178 192 - -
Lapu10g00362 382 FunFam trihelix transcription factor ASIL2 74 139 - -
Lapu10g00362 382 MobiDBLite consensus disorder prediction 165 290 - -
Lapu10g00362 382 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 37 351 IPR044823 -
Lapu10g00362 382 MobiDBLite consensus disorder prediction 351 382 - -
Lapu10g00362 382 Gene3D - 74 139 - -
Lapu10g00362 382 MobiDBLite consensus disorder prediction 353 382 - -
Lapu10g00362 382 MobiDBLite consensus disorder prediction 36 50 - -
Lapu10g00362 382 MobiDBLite consensus disorder prediction 1 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00362 Lapu-Chr10 5926546 5929534 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00362 1 365 Trihelix Transcription Factor Family AT3G14180 48.394 2.10e-106 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lapu10g00362 Myb_DNA-bind_4 7.6e-26 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00362 - - gmx:100812599 522.316