Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00356 ATGGCCAAAGTGGGAAAACTAACAAAGCTCAAGTCAGCAATCAAGAGATGGCCCTCATTGACCAAGCTCAGCCGCAGCAACAGCTCTGTCTCTTCCAACAAAGGAGCCACCGGAACATCCTCTTCATCCAAGGAACATGCACATGAACAAGAACTTCATGCTGTTTATGTTGGCAAATCTAGGAGGCGCTACCTCGTAAACTCCGAAGTGATCGACCACCCTGTGTTTCAGGAGCTAGTGGATAGGTCTTCATCTCATGATGATGGGGTGGTGGTGTCCTGCGAGGTGGTGCTGTTCGAGCACTTGCTGTGGATGCTTGAAAGCGAAGAGACCCAGTTGGGGTCCATGGATGAGCTGGTTGAGTTCTACTCTTGTGCATGCTGA 384 0.5026 MAKVGKLTKLKSAIKRWPSLTKLSRSNSSVSSNKGATGTSSSSKEHAHEQELHAVYVGKSRRRYLVNSEVIDHPVFQELVDRSSSHDDGVVVSCEVVLFEHLLWMLESEETQLGSMDELVEFYSCAC* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00356 127 PANTHER EXPRESSED PROTEIN 24 124 - -
Lapu10g00356 127 MobiDBLite consensus disorder prediction 22 43 - -
Lapu10g00356 127 MobiDBLite consensus disorder prediction 22 49 - -
Lapu10g00356 127 Pfam Auxin responsive protein 15 106 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00356 Lapu-Chr10 5887469 5887863 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00356 3 106 Calmodulin-binding Proteins AT4G34750 22.936 2.13e-06 42.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00356 - - gmx:100797158 201.06