Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00346 ATGGCTGCATTTTCCACCTTCCTTGTTATCCTCTTTCTCATACCAGCACTGACACCACTTGCTTCATCATCCCACCAAGAAAAGAAGAAAACTTTCATAATCCAAGTCCATCACCAAACAAAGCCTTCCATTTTCCCAACACACAGACACTGGTATGAGTCCTCACTCTCTTCCATTTCCGACAAGGCCTCCGTTATCCACACTTACGACACCGTTTTCCATGGCTTCTCTGCCAAGCTCTCACCTTCCGAGGCAAACAAGCTGCAAGCGCTCACCCACGTCGTCGCTCTCATACCCGAACAGGTTCGACAGCTTCACACCACGCGCTCCCCTCAGTTCCTCGGTCTCACCACCGCCGATCGAACTGGGTTGCTACACGAGACCGATTTCGGCTCGGATCTCGTCATAGGCGTCATCGACACCGGAATCTGGCCGGAGCGCCAGAGCTTCAACGGTCGTGACCTGGGCCCTGTTCCCACTAAGTGGAAGGGTCAGTGCGTCGCTGGGAAGAACTTTCCGGCCACCTCATGCAACCGGAAACTAATCGGAGCCAGGTACTTCTCCGGCGGGTACGAGGCCACCAATGGGAAGATGAACGAGACCACGGAGTTCCGCTCGGCAAGAGACTCCGATGGTCACGGCACGCACACGGCGTCGATCGCCGCCGGAAGGTACGTGTCGCCGGCGTCAACGTTAGGTTACGCGAAAGGAGTCGCCGCTGGCATGGCGCCGAAAGCGCGGCTGGCGGTGTATAAAGTCTGTTGGAACGGCGGGTGTTACGACTCCGATATCCTCGCCGCGTTCGACGCTGCCGTGGCCGACGGTGTCGACGTGGTGTCGCTCAGCGTCGGAGGAGTGGTGGTGCCGTACCACCTCGATGTGATTGCGATTGGCGCCTTCGGTGCAGCCTCTGCTGGCGTTTTTGTGTCCTCTTCCGCTGGCAACGGCGGTCCCGGTGGCCTCACCGTGACGAATGTGGCGCCGTGGGTGACCACTGTGGGTGCTGGAACTATAGACAGAGATTTTCCGGCCAATGTTAAGCTTGGTAATGGAAAAATAGTGCCCGGGATTAGTATTTATGGTGGACCGGGTTTAACTCCGGGTCGGATGTACCCGATTGTGTATGCGGGTATTGAACAATTTGGTGGTGGTGGTGGTGGTGGAGGTGATGGTTATTCATCTTCACTTTGTTTGGAAGGTTCCTTGGATCCCAAGACTGTGGAAGGAAAAATTGTTGTGTGTGATAGAGGTATTAATTCAAGGGCTGCTAAAGGTGAAGAAGTGAAAAAAAATGGAGGTGTGGGCATGATTTTAGCCAATGGTGTGTTTGATGGTGAAGGGTTGGTAGCTGATTGCCACGTGTTGCCTGCCACGGCGGTTGGTGCCACTGCCGGCGACGAAATCCGGAGGTACATTGGGAATTCGCGGTCACCGGCAACAGCCACAATTGTGTTCAAGGGAACAAGGGTTGGGGTTAGGCCAGCTCCTGTGGTGGCATCATTTTCAGCTAGAGGGCCTAACCCTGTGTCCCCTGAGATTTTGAAGCCTGATGTTATAGCCCCAGGGTTGAACATTCTTGCAGCTTGGCCTGATCATGTAGGACCTTCTGGGGTTCCCTCTGATGGGCGTAGGACTGAGTTTAACATACTCTCTGGGACTTCCATGGCTTGTCCTCATGTTTCTGGTTTGGCTGCTTTGTTGAAAGCAGCACATCCTGATTGGAGTCCTGCTGCTATCAGATCGGCCTTGATGACCACTGCTTATACCGTGGACAATAGGGGTGATCACATGTTGGATGAGTCCACTGGGAATGTTTCCTCTGTGTTTGATTACGGTGCTGGCCATGTTCATCCAGTTAAGGCCATGAACCCCGGTTTGGTTTATGATATCTCCCCTTCTGATTATGTGAATTTCTTGTGCAATTCAAATTACACCACCAAGAGCATCCATGTGATCACAAGGAAGAGTGCAGATTGCAGTGGGGCTAAAAGGGCAGGACATTCTGGGAATCTGAATTACCCTTCATTGTCTGCAGTGTTTCAACAATATGGAAAGAAGAGAATGTCTACACATTTTATTAGGTCTGTAACCAATGTTGGGGACCCTAATTCAGTGTACAAGGTCACCATCAAGCCACCAGGTGGGATGGTGGTCACAGTGAAGCCAGACACACTGACTTTCAGAAAGGTGGGTCAGAAGTTGAACTTTCTTGTTAGGGTACAAACTAGGGCTGTTAAGCTTACACCTGGAGGTTCTAGTGTGAAGAGTGGTTCCATAGTTTGGTCTGATGGGAAACATACTGTCACAAGTCCCTTGGTTGTGACAATGCAGCAACCTCTGGATTAG 2346 0.5205 MAAFSTFLVILFLIPALTPLASSSHQEKKKTFIIQVHHQTKPSIFPTHRHWYESSLSSISDKASVIHTYDTVFHGFSAKLSPSEANKLQALTHVVALIPEQVRQLHTTRSPQFLGLTTADRTGLLHETDFGSDLVIGVIDTGIWPERQSFNGRDLGPVPTKWKGQCVAGKNFPATSCNRKLIGARYFSGGYEATNGKMNETTEFRSARDSDGHGTHTASIAAGRYVSPASTLGYAKGVAAGMAPKARLAVYKVCWNGGCYDSDILAAFDAAVADGVDVVSLSVGGVVVPYHLDVIAIGAFGAASAGVFVSSSAGNGGPGGLTVTNVAPWVTTVGAGTIDRDFPANVKLGNGKIVPGISIYGGPGLTPGRMYPIVYAGIEQFGGGGGGGGDGYSSSLCLEGSLDPKTVEGKIVVCDRGINSRAAKGEEVKKNGGVGMILANGVFDGEGLVADCHVLPATAVGATAGDEIRRYIGNSRSPATATIVFKGTRVGVRPAPVVASFSARGPNPVSPEILKPDVIAPGLNILAAWPDHVGPSGVPSDGRRTEFNILSGTSMACPHVSGLAALLKAAHPDWSPAAIRSALMTTAYTVDNRGDHMLDESTGNVSSVFDYGAGHVHPVKAMNPGLVYDISPSDYVNFLCNSNYTTKSIHVITRKSADCSGAKRAGHSGNLNYPSLSAVFQQYGKKRMSTHFIRSVTNVGDPNSVYKVTIKPPGGMVVTVKPDTLTFRKVGQKLNFLVRVQTRAVKLTPGGSSVKSGSIVWSDGKHTVTSPLVVTMQQPLD* 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00346 781 SUPERFAMILY Subtilisin-like 105 626 IPR036852 GO:0004252|GO:0006508
Lapu10g00346 781 PRINTS Subtilisin serine protease family (S8) signature 551 567 IPR015500 -
Lapu10g00346 781 PRINTS Subtilisin serine protease family (S8) signature 209 222 IPR015500 -
Lapu10g00346 781 PRINTS Subtilisin serine protease family (S8) signature 131 150 IPR015500 -
Lapu10g00346 781 Pfam PA domain 389 468 IPR003137 -
Lapu10g00346 781 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 106 IPR037045 -
Lapu10g00346 781 Pfam Subtilase family 131 604 IPR000209 GO:0006508|GO:0008236
Lapu10g00346 781 CDD PA_subtilisin_like 345 483 - -
Lapu10g00346 781 Pfam Peptidase inhibitor I9 31 106 IPR010259 -
Lapu10g00346 781 FunFam Subtilisin-like protease SBT1.5 133 350 - -
Lapu10g00346 781 Pfam Fibronectin type-III domain 670 774 IPR041469 -
Lapu10g00346 781 CDD Peptidases_S8_3 104 588 IPR034197 -
Lapu10g00346 781 Gene3D - 639 777 - -
Lapu10g00346 781 Gene3D - 339 491 - -
Lapu10g00346 781 Gene3D Peptidase S8/S53 domain 133 635 IPR036852 GO:0004252|GO:0006508
Lapu10g00346 781 ProSiteProfiles Serine proteases, subtilase domain profile. 111 622 - -
Lapu10g00346 781 FunFam Subtilisin-like protease SBT1.5 639 777 - -
Lapu10g00346 781 ProSitePatterns Serine proteases, subtilase family, serine active site. 552 562 IPR023828 -
Lapu10g00346 781 FunFam Subtilisin-like protease SBT1.9 20 106 - -
Lapu10g00346 781 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 58 774 IPR045051 -
Lapu10g00346 781 FunFam subtilisin-like protease SBT1.5 339 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00346 Lapu-Chr10 5786982 5790162 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00346 31 780 Subtilisin-like Serine Gene Family AT3G14240 76.323 0.0 1192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00346 - - gmx:100808511 1365.9