Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00341 ATGGAGAATCGGAAGACGTCGGCATACTACGAGAACAGAGCGGTGCAGTTTGGGGTGGTCAGCACCGAGTGGCTCTCTCAGGCCCACTCCGCCACCCTCCACCCTCCTCCTTCTCCTCCTCCCCATAATGACGCCGACAAACCCTTCTCCGTCATCCAGGAGTTCGACACCTGGCGCAAGCACCCCGATTTGGCGGAGGCCGTCGCCGCCATTCGCGCCTTGGCCGCCGTAATCCGCTCTAGCGAGGCCACCACCATGATGCAGCTCGAAATCCAACTCAAAACCGCCTCCGATTCTCTCAAATGTTGGGATACAACCTCTATCTCTTTAACCGCCGCCTGCGATCTCTTCATGCGATACGTCACCAGGACTTCTGCTCTGGAATACGATGATTTCAATTCTGCCAAGTCTCGCTTGCTCGAACGCGCCGATAAGTTCGGCGAAATCTCCTTCAAGGCTCGCGAAGTCATTGCAATGCTGAGCCAGGATTTTATATTCGACGGCTGCACAATTCTTGTTCACGGTTTCTCCAGAGTCGTACTTCAGATTCTCAAACTCGCCGCACAGAATAAAAAGCTCTTTAGAGTCTTCTGCACTGAGGGGAGACCGGATAGAACGGGTTTGCGGTTGTCCAATGAGCTGGCCAAGCTTGATGTCCCTGTGAAGCTTGTTATAGACTCTGCAGTGGCGTATACTATGGATGAAGTTGACATGGTGTTTGTTGGGGCAGATGGAGTTGTTGAAAGTGGCGGTATAATCAACATGATGGGGACTTACCAAATTGCAATGGTCGCTAAGAGTATGAACAAGCCACTTTATGTGGCAGCTGAAAGCTACAAGTTTGCTAGATTTTACCCTCTGGACCAAAAGGATTTGTCCCCTGCCTTACGACCGGTTGATTTTGGCGTGCCTATTCCATCCAAGGTTGAGGTTGAATGTTCTGCGCGGGATTATACTCCTCCTCAGTATCTCACTCTGCTTTTCACTGATTTAGGTGTTCTTACTCCTTCAGTTGTTAGTGATGAACTCATCCAGCTATACTTGTAG 1047 0.5062 MENRKTSAYYENRAVQFGVVSTEWLSQAHSATLHPPPSPPPHNDADKPFSVIQEFDTWRKHPDLAEAVAAIRALAAVIRSSEATTMMQLEIQLKTASDSLKCWDTTSISLTAACDLFMRYVTRTSALEYDDFNSAKSRLLERADKFGEISFKAREVIAMLSQDFIFDGCTILVHGFSRVVLQILKLAAQNKKLFRVFCTEGRPDRTGLRLSNELAKLDVPVKLVIDSAVAYTMDEVDMVFVGADGVVESGGIINMMGTYQIAMVAKSMNKPLYVAAESYKFARFYPLDQKDLSPALRPVDFGVPIPSKVEVECSARDYTPPQYLTLLFTDLGVLTPSVVSDELIQLYL* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00341 348 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA 19 348 - -
Lapu10g00341 348 SUPERFAMILY NagB/RpiA/CoA transferase-like 61 347 IPR037171 -
Lapu10g00341 348 FunFam Translation initiation factor eIF-2B subunit alpha 47 149 - -
Lapu10g00341 348 FunFam Translation initiation factor eIF-2B subunit alpha 152 348 - -
Lapu10g00341 348 Pfam Initiation factor 2 subunit family 62 336 IPR000649 GO:0044237
Lapu10g00341 348 Gene3D - 47 149 IPR042528 -
Lapu10g00341 348 Gene3D - 152 348 IPR042529 -
Lapu10g00341 348 MobiDBLite consensus disorder prediction 28 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00341 Lapu-Chr10 5739983 5742175 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00341 7 348 Eukaryotic Initiation Factors Gene Family AT1G53880 79.539 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00341 K03239 - gmx:102669842 612.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00341 10 5739983 5742175 Lapu10g00341 10 5739983 5742175 ECH