Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00326 ATGGTGTTGGATCCGAGGCTGGTGCTGGTGGTGTTCATCAGTACCTGCATTTTGCTCATCAATGGTGACACAGATCCAAATGACGCTGCTGCTCTCAAGGTTATGTTTGAAAGTATGAACTCACCATCCCAGCTAAATTGGAATGGGGATGATCCTTGTGGGCAGTCTTGGCAAGGCATCACTTGTTCTGGCAATCGAGTCACAGAGATCAAGTTACCCGGTCGTTCGCTTTCCGGATCTTTGGGTTACCAGCTAGAATCCTTGTCATCGGTTACAAACTTAGACTTGAGTAACAACAATCTGGGTGGCACCATACCATACCAACTTCCTCCTAATCTGCAGTACTTAAATCTTGCCAATAATAATTTCAATGGGGGTATCCCTTATTCTCTTTCTGAAAAGGCTTCCCTTGTAGTCCTGAATCTTGGTCACAATCAGCTCCAGCAAGCACTTACTGTTGATTTTCAAAAGCTTTCTTCCCTCTCTACATTGGATCTCTCGTTTAATTCTTTGACTGGTGACCTGCCTCAGACTTTGAGCTCACTTTCTAGCATAAGCACCATGTATCTGCAAAACAACCAGTTTACAGGCACCATTAATGTCCTTGCTAATCTGCCTCTGGAAACTTTGAATGTGGGAAATAATCATTTTACTGGCTGGATTCCAGAACAATTGAATAACATAAACCTGCAAAAGGATGGTAATGATTGGAGCTCAGGAGCTGCACCCCCACCTCCTCCTGGAACACCTCCAGCGGTAACAAGAAATCGAAATCACAAATCTGGTGGACATACCCCATCAGATGCTGGCTCAAGTGCCGATGGAGGCAAAAAATCTGGTATTGGAGGTGGTGGCATTGCTGGAATAGTGATCTCCATCTTGGTTGTTGGGGCAATAGTAGCATTCTTTCTGGTGAAGAAAAGATCCAAAAAGTCGTTTAATGATATTGAAAAGCTTGACAATCAGCCCTTGGCTCCTCATACATCATCACATCATAATGAAATGAATGCCATGCCAACTTCATCTGTAATTGACTTGAAGACGTTTGATACATCCGCGGCGCCAATAAATCTTAAACCTCCACCTTTTGATCGTCATAAATCATTTGATGAGGATGAGTTTTCAAAGAAGTCTACTACAGTCAATAAGCCCACTGCAGTCAAGAAGACTGTCACAGCTCCTACAAATGTAAAATCTTATTCTATAGCTGACCTGCAGATTGCTACTGGAAGCTTCAGTGTAGATCAACTTCTCGGTGAGGGGTCTTTTGGACGTGTGTACCGTGCTCAATTTGATGATGGAAAGGTTCTTGCTGTCAAGAAGATAGATTCATCTGTCCTTCCCAATGATTTGTCTGATGATTTTGTGGATCTGGTTTCAAGCATATCCCATTTGCACCATCCCAATGTGACAGAGCTTGTAGGTTATTGTTCAGAGCATGGACAACACCTACTAGTCTATGAGTTTCATAAAAATGGATCACTGCACGACTTCCTTCACCTACCAGACGAGTATAGTAAACCATTGATATGGAATTCACGTGTGAAGATTGCTCTGGGGATTGCACGAGCTTTAGAGTACCTACATGAAGTTTGTTCACCATCTGTTGTTCATAAGAATATAAAGTCGGCCAATATATTACTTGATACAGATCTCAATCCTCATCTTTCCGACAGTGGATTGGCCAGCCATATTCCAAATGCAAATCAGGTATTGAACAATGATTCTGGATCTGGATATGAAGCTCCCGAAGTTGGCATGTCTGGCCAATATACTCTTAAGAGTGATGTCTTTAGCTTTGGAGTTATCATGTTGGAACTTCTTAGTGGACGAAAACCATTTGATAGCTCAAGGCCAAGGTCTGAGCAGGCTTTGGTTCGGTGGGCAACACCTCAACTCCATGATATCGATGCTCTCGCAAAAATGGTTGATCCTGCATTAGAAGGACTATACCCTGTGAAGTCTCTTTCTCGATTTGCGGATGTTGTTGCTCTTTGTGTTCAGCCGGAGCCGGAATTCCGACCACCTATGTCAGAAGTGGTTCAAGCGCTGGTTCGATTAGTGCAGCGAACTAACATGAGTAAGAGGACGTTTGGAACTGATCAAGGAGGATCCAACCGAGGAGGCGATAACCAAGAATCACAAGATATGTAA 2154 0.4327 MVLDPRLVLVVFISTCILLINGDTDPNDAAALKVMFESMNSPSQLNWNGDDPCGQSWQGITCSGNRVTEIKLPGRSLSGSLGYQLESLSSVTNLDLSNNNLGGTIPYQLPPNLQYLNLANNNFNGGIPYSLSEKASLVVLNLGHNQLQQALTVDFQKLSSLSTLDLSFNSLTGDLPQTLSSLSSISTMYLQNNQFTGTINVLANLPLETLNVGNNHFTGWIPEQLNNINLQKDGNDWSSGAAPPPPPGTPPAVTRNRNHKSGGHTPSDAGSSADGGKKSGIGGGGIAGIVISILVVGAIVAFFLVKKRSKKSFNDIEKLDNQPLAPHTSSHHNEMNAMPTSSVIDLKTFDTSAAPINLKPPPFDRHKSFDEDEFSKKSTTVNKPTAVKKTVTAPTNVKSYSIADLQIATGSFSVDQLLGEGSFGRVYRAQFDDGKVLAVKKIDSSVLPNDLSDDFVDLVSSISHLHHPNVTELVGYCSEHGQHLLVYEFHKNGSLHDFLHLPDEYSKPLIWNSRVKIALGIARALEYLHEVCSPSVVHKNIKSANILLDTDLNPHLSDSGLASHIPNANQVLNNDSGSGYEAPEVGMSGQYTLKSDVFSFGVIMLELLSGRKPFDSSRPRSEQALVRWATPQLHDIDALAKMVDPALEGLYPVKSLSRFADVVALCVQPEPEFRPPMSEVVQALVRLVQRTNMSKRTFGTDQGGSNRGGDNQESQDM* 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00326 717 MobiDBLite consensus disorder prediction 254 268 - -
Lapu10g00326 717 ProSitePatterns Protein kinases ATP-binding region signature. 418 441 IPR017441 GO:0005524
Lapu10g00326 717 MobiDBLite consensus disorder prediction 355 375 - -
Lapu10g00326 717 Pfam Leucine Rich Repeat 160 182 IPR001611 GO:0005515
Lapu10g00326 717 Pfam Leucine Rich Repeat 112 132 IPR001611 GO:0005515
Lapu10g00326 717 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 490 698 - -
Lapu10g00326 717 PRINTS Leucine-rich repeat signature 91 104 - -
Lapu10g00326 717 PRINTS Leucine-rich repeat signature 158 171 - -
Lapu10g00326 717 SUPERFAMILY L domain-like 44 227 - -
Lapu10g00326 717 Gene3D Phosphorylase Kinase; domain 1 372 489 - -
Lapu10g00326 717 Gene3D Transferase(Phosphotransferase) domain 1 491 705 - -
Lapu10g00326 717 MobiDBLite consensus disorder prediction 232 276 - -
Lapu10g00326 717 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 376 489 - -
Lapu10g00326 717 Pfam Leucine rich repeat N-terminal domain 26 63 IPR013210 -
Lapu10g00326 717 Gene3D Ribonuclease Inhibitor 136 239 IPR032675 -
Lapu10g00326 717 MobiDBLite consensus disorder prediction 695 717 - -
Lapu10g00326 717 ProSiteProfiles Protein kinase domain profile. 412 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00326 717 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 10 689 IPR046959 -
Lapu10g00326 717 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 25 248 - -
Lapu10g00326 717 Gene3D Ribonuclease Inhibitor 27 135 IPR032675 -
Lapu10g00326 717 SUPERFAMILY Protein kinase-like (PK-like) 391 684 IPR011009 -
Lapu10g00326 717 Pfam Protein tyrosine and serine/threonine kinase 414 684 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00326 Lapu-Chr10 5612006 5619550 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00326 8 716 Strubbelig Receptor Gene Family AT1G53730 64.966 0.0 851
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Lapu10g00326 PK_Tyr_Ser-Thr 2.2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00326 - - gmx:100780323 1247.65