Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lapu10g00325 | ATGATGACCACCAACACCAATATCAAACACAACAACAACAGCAGCAACGTTGGAGAATTTGGGGACACCACTCTGACCAAGGTTTTTGTTGGGGGCTTAGCATGGGAGACTCCCAAGGATGCCCTCAGAGACCATTTTGAGAAGTATGGTGAGATCCTTGAAGCTGTCATAATTTCTGATAAGCTCACTGGCAAATCCAAAGGCTATGGCTTTGTTACTTTCAAAGAGGCTGAGGCTGCCAAGAAGGCTTGCGAGGACTCAGCAACTCTTGTCATCAATGGCCGTCGAGCTAACTGCAATCTGGCTTTCTTGGGTGCTCGTCGTCCAAGGTCTTCTTCCACTGCTTCACCACCTCCACAACCACAAGGAGGATCGAACAGTGGATTGGTGAAGAACAATGCAGCAGGGAATCACGTGCAGCCATATTATCAGCCACTGAGAACCTCTGCTATGCCCTTCCACAATCACCCTCTTCCTTTCTATGGGTACACTCCAACCTACATTGTGACAGATGTAAACTACAATTACAACCAGAAGCTGAGCTATGGCAGCGGTGGGGCCTACATGAATGGCCAGCAGTTTTCTCATGTGTACCCGAGGCAGGGTATTGTGGGTGGCAACACAGTAATGCCAGTGTACCCTCTCTATCAGTATCATCATCCAACGGAGACCATAGGCCTACCAGCTCACAACTTTTATCCAACGGCACCCTGGGCCCCATTCACCATCATTTCCAAACCATCCTCTATCATTCCTCATACAGGTACAGTTGGCACAGGCGAGTGCTTT | 789 | 0.4892 | MMTTNTNIKHNNNSSNVGEFGDTTLTKVFVGGLAWETPKDALRDHFEKYGEILEAVIISDKLTGKSKGYGFVTFKEAEAAKKACEDSATLVINGRRANCNLAFLGARRPRSSSTASPPPQPQGGSNSGLVKNNAAGNHVQPYYQPLRTSAMPFHNHPLPFYGYTPTYIVTDVNYNYNQKLSYGSGGAYMNGQQFSHVYPRQGIVGGNTVMPVYPLYQYHHPTETIGLPAHNFYPTAPWAPFTIISKPSSIIPHTGTVGTGECF | 263 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lapu10g00325 | 263 | MobiDBLite | consensus disorder prediction | 108 | 131 | - | - | |
Lapu10g00325 | 263 | SMART | rrm1_1 | 27 | 100 | IPR000504 | GO:0003723 | |
Lapu10g00325 | 263 | FunFam | Putative RNA-binding protein ARP1 | 20 | 110 | - | - | |
Lapu10g00325 | 263 | SUPERFAMILY | RNA-binding domain, RBD | 22 | 124 | IPR035979 | GO:0003676 | |
Lapu10g00325 | 263 | Gene3D | - | 3 | 116 | IPR012677 | - | |
Lapu10g00325 | 263 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 26 | 104 | IPR000504 | GO:0003723 | |
Lapu10g00325 | 263 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 28 | 95 | IPR000504 | GO:0003723 | |
Lapu10g00325 | 263 | PANTHER | BOULE-RELATED | 12 | 232 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lapu10g00325 | Lapu-Chr10 | 5602563 | 5604390 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lapu10g00325 | 22 | 167 | C2H2 Transcription Factor Family | AT2G19380 | 29.221 | 3.10e-15 | 73.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lapu10g00325 | - | - | vra:106778170 | 456.062 |