Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00323 ATGACCAACCATCACTTCAAACACTCCATTCCCTCAGTTTTTCTCATGCCATCACCATCTTCATCTTCCTCTGCATATACCCTTTACAATTCTTACATGGTTTCCAACTTAATGGTCTCTGTCATAATTCCCATATTCCTCTTGTCCTTGTTTGTTGTTCAAGTTTCCTCTTGTAGCCATATTGATAAACTCTCCCTCTTGGCCTTCTCTGGGAACATATCCACCTATCCACCTTTTCCTTCTCTCAATTGGTCTGATTCTCTTGATTGTTGTGCTTGGGAAGGCATTACTTGTGATGGGGATCTTAGAGTCACACATCTTTTGCTACCTTCTAGAGGCCTCACTGGCTTCATCTCCCCCTCTCTCACAAACCTCTCTTCTCTCTCTCACCTTAATCTCTCACATAATAGATTATCTGGTAGTCTCCAGCACCAGCTTTTCTCATTGCTCAATCAGTTGCTGGTTCTTGATTTGAGCTACAACCATCTATCTGGTGAATTGCCACCTTTTGTTGGTGATAACAGTGGCAAAAATAGCAGTGGTGGTGTTATCCAGGAGCTGGATTTGTCCAGTAACTTTTTCAATGGGACACTTCCAAATTCTTTGCTCGAGAACTTGGCAGCTGCAGCAGCTGGAGGGAGTTTGGTGTCTTTGAATGTTAGTAATAACAGCTTCTCAGGGCCTATCCCAAGTGATCTTTTTCATGCTGTTTCTCTGACAGAAATCTCGTTGCCCCTCAATAGACTCACTGGAACAATTGGTGATGATATTGTTGGCCTTACCAACCTCACAGTTTTGGAGCTCTACTCCAATCATTTCACAGGTTTCATCCCCCATGATATTGGTAAACTCTCCAAGTTGGAACGGCTACTCCTTCATGTCAACAATTTGACAGGTACTATGCCCCCGTCTCTGATGAACTGTGTCAATCTTGTGGTGTTGAATTTAAGGGTCAACCTCTTGGAGGGAAATCTCTCTGCATTCAATTTCTCAGGATTCCTCAGCCTTACTACACTTGACCTTGGCAACAATTATTTTACCGGTGTTTTACCACCAACCCTTTATGCATGCAAGTCACTTTCAGCTGTGAGGTTTGCATCTAATCAGCTTGAGGGAGAGATTTCACCTAGGATACTTGAACTAGAGTCTTTGTCTTTCCTATCGATTTCTACTAACAAGCTGAGGAATGTTACTGGGGCTCTGAGGATACTCCGGGGGCTCAAGAACCTTAGTACCCTTATGCTCTCCAAGAATTTTTTCAATGAAATGATACCACAAGATGTGAACATAATAGAGCCAGATGGATTTCAAAAACTGCAGGTTTTAGGATTTGGTGGTTGTAATTTCACAGGTCAAATACCTGGATGGCTAGTGAAACTCAAGAAGCTTGAGGCCCTGGACCTGTCCTTTAATCAAATTAGTGGTCCAATTCCTCCGTGGTTGGGTACCCTTCCTCAACTTTTCTACATGGACTTGTCTGTTAACCAACTTACAGGAGTATTTCCAGTAGAGCTCACAGAACTCCCAGCACTGACATCACAGCAGGCAAATGATAAAGTGGAAAGGACTTACCTTGAGTTACCTGTCTTTGCTAATGCAAATAATGTTTCCCTACTGCAATATAATCAGCTTTCAGCGCTACCTCCAGCAATATATCTGGGAAGCAATCACCTTAATGGCAGTATCCCTATTGAGATTGGGAAACTCAAAGTCCTTCATCAGCTTGACATGAAAAATAACAACTTCTCTGGTGATATACCGGTTCAGTTTTCAAACCTGACTAACTTAGAGAAACTAGACCTCTCAGGAAACCACCTATCTGGTGAAATTCCTGATTCCCTTAGAAGATTGCATTTCTTGTCTTTTTTCAGTGTAGCATTCAATAATCTTCAAGGACAGATACCAACTGGTGGTCAATTTGATACTTTCTCCTACTCCAGCTTCGAAGGAAACGAGCAGTTGTGCGGTCCAGTCATTCAGCGTTCTTGTCCTCAACAAAATACTACTAATGCCACTGCAGCTAGTCGCGGCTCAAACAAAAAAGTAATGATTGCACTTGTCATTACAGTCAGTTTTGGCTTTGGTTCCTTGATAACAGTGTTGACTCTGTGGATTCTATCCAAGAGAAGGGTCAATCCAGGAGGAGAGCCTGACAAGATTGAAATGGAATCAATTTCTGCCTACTCTAACAATGGAATTCATCCTGAAGTTGACAAGGAGACTAGCCTGGTGGTATTGTTTCCCAACAAGAATAATGAAACCAAGGACCTTACCATATTTGACATCCTGAAAGCCACTGAAAATTTCAGTCAGGCAAACATAATAGGATGCGGGGGCTTTGGTTTGGTTTATAAAGCAACATTACCAAATGGAACCACACTGGCCATCAAGAAACTTTCAGGAGACTTGGGCCTCATGGAAAGGGAATTCAAAGCAGAAGTAGAGGCTTTGTCAACAGCACAGCATGAGAATCTGGTGGCATTACAAGGCTATTGTGTGCATGATGGATTCCGGCTTCTCATATACACGTATATGGAAAATGGAAGCCTGGATTACTGGTTACATGAAAAGCCTGATGGTGCATCTCAACTTGATTGGCCAACTCGCTTGAAGATTGCACAAGGTGCAAGCTACATTCCCCCAGAGTATGGACAAGCATGGGTGGCTACTCTGAGAGGAGATGTGTACAGCTTTGGGGTTGTCATGCTTGAGCTGCTAACAGGGAGGAGGCCTGTAGATGTATGCAAGCCAAAAATTTCAAGGGAGTTGGTTGGCTGGGTTCAACAAATGAGAATTGAAGGAAAACAAGATCAAGTATTTGACCCTCTTCTGAGAGGGAAGGGGTTTGAGGGAGAGATGCTAAAGGTACTGGATGTGGCTTGCATGTGTGTCAGCCACAATCCTTTCAAGAGACCAAGCATCAGAGAAGTTGTTGAATGGCTGAAGAATGTAGGATCAGACAACCAGCCAACACAGAAATAA 2982 0.4299 MTNHHFKHSIPSVFLMPSPSSSSSAYTLYNSYMVSNLMVSVIIPIFLLSLFVVQVSSCSHIDKLSLLAFSGNISTYPPFPSLNWSDSLDCCAWEGITCDGDLRVTHLLLPSRGLTGFISPSLTNLSSLSHLNLSHNRLSGSLQHQLFSLLNQLLVLDLSYNHLSGELPPFVGDNSGKNSSGGVIQELDLSSNFFNGTLPNSLLENLAAAAAGGSLVSLNVSNNSFSGPIPSDLFHAVSLTEISLPLNRLTGTIGDDIVGLTNLTVLELYSNHFTGFIPHDIGKLSKLERLLLHVNNLTGTMPPSLMNCVNLVVLNLRVNLLEGNLSAFNFSGFLSLTTLDLGNNYFTGVLPPTLYACKSLSAVRFASNQLEGEISPRILELESLSFLSISTNKLRNVTGALRILRGLKNLSTLMLSKNFFNEMIPQDVNIIEPDGFQKLQVLGFGGCNFTGQIPGWLVKLKKLEALDLSFNQISGPIPPWLGTLPQLFYMDLSVNQLTGVFPVELTELPALTSQQANDKVERTYLELPVFANANNVSLLQYNQLSALPPAIYLGSNHLNGSIPIEIGKLKVLHQLDMKNNNFSGDIPVQFSNLTNLEKLDLSGNHLSGEIPDSLRRLHFLSFFSVAFNNLQGQIPTGGQFDTFSYSSFEGNEQLCGPVIQRSCPQQNTTNATAASRGSNKKVMIALVITVSFGFGSLITVLTLWILSKRRVNPGGEPDKIEMESISAYSNNGIHPEVDKETSLVVLFPNKNNETKDLTIFDILKATENFSQANIIGCGGFGLVYKATLPNGTTLAIKKLSGDLGLMEREFKAEVEALSTAQHENLVALQGYCVHDGFRLLIYTYMENGSLDYWLHEKPDGASQLDWPTRLKIAQGASYIPPEYGQAWVATLRGDVYSFGVVMLELLTGRRPVDVCKPKISRELVGWVQQMRIEGKQDQVFDPLLRGKGFEGEMLKVLDVACMCVSHNPFKRPSIREVVEWLKNVGSDNQPTQK* 994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00323 993 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 232 325 - -
Lapu10g00323 993 Pfam Leucine Rich Repeat 595 616 IPR001611 GO:0005515
Lapu10g00323 993 ProSitePatterns Protein kinases ATP-binding region signature. 775 798 IPR017441 GO:0005524
Lapu10g00323 993 Pfam Protein tyrosine and serine/threonine kinase 772 879 IPR001245 GO:0004672|GO:0006468
Lapu10g00323 993 SUPERFAMILY L domain-like 436 665 - -
Lapu10g00323 993 Gene3D Ribonuclease Inhibitor 61 208 IPR032675 -
Lapu10g00323 993 ProSiteProfiles Protein kinase domain profile. 769 993 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00323 993 Gene3D Phosphorylase Kinase; domain 1 733 844 - -
Lapu10g00323 993 FunFam Tyrosine-sulfated glycopeptide receptor 1 330 668 - -
Lapu10g00323 993 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 878 982 - -
Lapu10g00323 993 SMART LRR_typ_2 125 149 IPR003591 -
Lapu10g00323 993 SMART LRR_typ_2 260 284 IPR003591 -
Lapu10g00323 993 SMART LRR_typ_2 381 403 IPR003591 -
Lapu10g00323 993 SMART LRR_typ_2 460 484 IPR003591 -
Lapu10g00323 993 SMART LRR_typ_2 150 174 IPR003591 -
Lapu10g00323 993 SMART LRR_typ_2 593 617 IPR003591 -
Lapu10g00323 993 SMART LRR_typ_2 333 357 IPR003591 -
Lapu10g00323 993 Pfam Leucine Rich repeat 461 475 IPR001611 GO:0005515
Lapu10g00323 993 Gene3D Transferase(Phosphotransferase) domain 1 874 993 - -
Lapu10g00323 993 SMART serkin_6 769 981 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00323 993 SUPERFAMILY L domain-like 57 203 - -
Lapu10g00323 993 ProSiteProfiles Leucine-rich repeat profile. 595 617 IPR001611 GO:0005515
Lapu10g00323 993 Pfam Leucine rich repeat N-terminal domain 62 99 IPR013210 -
Lapu10g00323 993 Gene3D Ribonuclease Inhibitor 209 328 IPR032675 -
Lapu10g00323 993 FunFam Leucine-rich repeat receptor protein kinase MSP1 735 844 - -
Lapu10g00323 993 SUPERFAMILY Protein kinase-like (PK-like) 754 985 IPR011009 -
Lapu10g00323 993 SUPERFAMILY L domain-like 214 513 - -
Lapu10g00323 993 PRINTS Leucine-rich repeat signature 128 141 - -
Lapu10g00323 993 PRINTS Leucine-rich repeat signature 593 606 - -
Lapu10g00323 993 FunFam Receptor-like protein 2 60 179 - -
Lapu10g00323 993 Gene3D Ribonuclease Inhibitor 329 672 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00323 Lapu-Chr10 5578200 5582166 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00323 33 700 Miscellaneous Gene Families AT1G17240 47.376 0.0 592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Lapu10g00323 PK_Tyr_Ser-Thr 7.7e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00323 - - gmx:100781943 1360.51