Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00319 ATGGCTTCCTCCTATGCTTCCTCTGCCATTGCAGCTGTTGCCATCTCCTCCCCAAGTTCCAAAAATGGATCACTCTTGGGAACCCCAAAAGCTTCTTTTCTCAGTGGGAGAAAACTGAAGGTGAACAGTTTTACAGCACCAGTTGGAGCACGATCCAGCACTACAGTGTGTGCAGTTGCTGACCCTGATAGGCCTCTGTGGTTCCCAGGAAGCACCCCTCCTCCATGGCTAGATGGCAGTTTGCCAGGAGATTTTGGGTTTGATCCTCTCGGTCTTGGATCTGATCCTGAGAGCCTGAGATGGAATGTTCAGGCAGAGCTTGTGCACTGCAGATGGGCCATGTTGGGTGCTGCTGGCATTTTCATCCCAGAATTCCTCACAAAGATTGGTGTCCTTAACACCCCTTCATGGTACACTGCTGGAGAGTTGGAGTACTTCACAGACACCACCACACTCTTCATAGTTGAGCTCTTTTTCATTGGGTGGGCTGAGGGTAGAAGGTGGGCTGACATCATCAAGCCAGGCTGTGTCAACACTGACCCCATCTTTCCCAACAACAAGCTCACAGGAACTGATGTTGGGTACCCAGGTGGGCTTTGGTTTGATCCACTTGGCTGGGGAAGTGGGTCTCCTGAGAAGATCAAGGAGTTGAGAACAAAGGAGATCAAGAATGGGAGGTTGGCCATGTTGGCTGTGATGGGTGCATGGTTCCAGCACATATACACTGGCACTGGTCCTATTGACAACCTCTTTGCTCACCTTGCAGATCCAGGCCATGCTACTATTTTTGCTGCTTTCACTCCCAAGTGA 810 0.5062 MASSYASSAIAAVAISSPSSKNGSLLGTPKASFLSGRKLKVNSFTAPVGARSSTTVCAVADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGSDPESLRWNVQAELVHCRWAMLGAAGIFIPEFLTKIGVLNTPSWYTAGELEYFTDTTTLFIVELFFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFTPK* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00319 269 Pfam Chlorophyll A-B binding protein 73 239 IPR022796 -
Lapu10g00319 269 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 24 267 IPR001344 GO:0009765|GO:0016020
Lapu10g00319 269 SUPERFAMILY Chlorophyll a-b binding protein 59 267 - -
Lapu10g00319 269 FunFam Chlorophyll a-b binding protein, chloroplastic 74 259 - -
Lapu10g00319 269 Gene3D Chlorophyll a/b binding protein domain 74 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00319 Lapu-Chr10 5545914 5548131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00319 45 269 Chloroplast and Mitochondria Gene Families AT3G61470 88.496 3.21e-149 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00319 K08908 - gmx:100784089 537.724