Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00315 AACTTGTTAGCGAAGGAGTCAATGTCTACGCATCATAAAACAAGGAGAGACCAAATCCACAGCAAAACAAAAACACCAACACAAATTCTCCTTGATCTCTTTCTGTTTCATCAATCTCCTCTTCAATTCTTTCTTTCAAACTACGAACACAGAGCTCAGTGTTCACCAAAATCAATGGCCATTGTTGGTGTCGGTTTCCGTCCCACAGAACAAGAACTTGTAGAATTCTACCTCAAACACAAGTTGCTCGCTGATGATCCCCGTGTCCACGTCATCCCTGTCATTGATCTCTGCGATGTGGAACCTTCGGATGTACCAGGGATACTTGCAAGATCACCGATACGATTTGGTAACCCAGAATGGTTTTTCTTCAGTCCTGTTGATTTCAAGTATTCAAACAGTAAAAGGGTTAATAGGAAAACCAAGTGTGGCTTCTGGAAAGCCACTGGAAAAGACCGTGACGTTAGGAGCAGGAACACCAACACTCGCATTGCCACAAAGAAGACTCTTGTTTACTACAACGGCAGTGTCTCCTGTGGTGTCAAGTCCAACTGGATTATTCACGAATATCATGCTGTTACCTTTCATGAAAGCAAGAGGACTTTTGTTTTATTCCGCTTGATGAAGAGGCCTGGGAAGACAGCGGAAAGCGGAACTGATGCACTAACCTGTGATGAAGGGGTCCCCAGTAATGTCAAAGTTTCTGAATATGAAATTCAGGCAACAGCAGAAGGAATCCCATCTGGAGGTCCTTTTACTGGAGTAGAAACAATCTTTCAGACTACACCTCAGGCAGAGACACACTTCTCGCCTACACAACTGTCTCCAACTGGTATTGAGCAAGAAGAAGCATCTCTTCAAGATTATACATTCAATAATGCCTATTTTGAAAATGAAAACAGCATTATGAAGAATTCATTTGGAACTACAAAGGAAAATGAGTTCTTGAATCACATCATAGCTGATGAAAGTTTAGTTATTGATGAAGAAAGTATATATACTTTTGTGGGTAACACCCTTCAATCAGAATCATTGCAAGGATTATATTTTGAAAACAGTGATACAGATACAGAAGTGATGTCTAAACTGGACGTTAATTTTGTGAAAAGTTCAGTCGTGTCTCGTGAATATCCCAATATT 1140 0.4061 NLLAKESMSTHHKTRRDQIHSKTKTPTQILLDLFLFHQSPLQFFLSNYEHRAQCSPKSMAIVGVGFRPTEQELVEFYLKHKLLADDPRVHVIPVIDLCDVEPSDVPGILARSPIRFGNPEWFFFSPVDFKYSNSKRVNRKTKCGFWKATGKDRDVRSRNTNTRIATKKTLVYYNGSVSCGVKSNWIIHEYHAVTFHESKRTFVLFRLMKRPGKTAESGTDALTCDEGVPSNVKVSEYEIQATAEGIPSGGPFTGVETIFQTTPQAETHFSPTQLSPTGIEQEEASLQDYTFNNAYFENENSIMKNSFGTTKENEFLNHIIADESLVIDEESIYTFVGNTLQSESLQGLYFENSDTDTEVMSKLDVNFVKSSVVSREYPNI 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00315 380 MobiDBLite consensus disorder prediction 1 21 - -
Lapu10g00315 380 Gene3D NAC domain 69 214 IPR036093 GO:0003677|GO:0006355
Lapu10g00315 380 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 62 235 - -
Lapu10g00315 380 Pfam No apical meristem (NAM) protein 62 191 IPR003441 GO:0003677|GO:0006355
Lapu10g00315 380 SUPERFAMILY NAC domain 61 209 IPR036093 GO:0003677|GO:0006355
Lapu10g00315 380 ProSiteProfiles NAC domain profile. 60 210 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00315 Lapu-Chr10 5507278 5509565 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00315 62 211 NAC Transcription Factor Family AT4G35580 45.161 2.76e-36 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lapu10g00315 NAM 1e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00315 - - gmx:100780890 446.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00315 10 5507278 5509565 Lapu10g00315 10 5507278 5509565 ECH