LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu10g00314	ATGGAGATCATAGGATTCGGTTTCCGTCCCACAGAAGAAGAACTTGTCGACTATTACCTCAAACATAGGTTGCTCGGTGATGATCCACGTGTCCACGTCATCCCCGACATTGACCTTTGTGAAGTGGAACCTTGGGAAGTACCAGAGTTATTAGCGGCATCAGATGTGCAATTCTATCTGCCAGAATGGGTTTTCTTCAGTCCTGTTGATTTCAAGTATTCAAATAGTAAAAGGGTTAACAGGACAACCAAGTGTGGCTTCTGGAAACCCACTGGAAAAGATCGTGACATTAGGAGCGTGGACACCAACACTCTCATTGCCACAAAGAAGACTCTTGTTTACTATGAAGGTCGTGTTTCCCGTGGTGTCAAGTCCAACTGGGTTATTCATGAATACCATGCTGTTACCTTTCACGAAAGCCAGAGGACCTCTGTTTTGTGTCGCTTGATGGAGAAACCTGGGAAAATAACTGAAGATGAAGGGGAGCCCAGTAGAAACATGGTTTCGGGCTATGAAAATCCGGCAATAGCTGGAGGAATTTCTTCAAGAGGTACTTATACTGGAATAAAAAATGAAGATTCCTTTCTTCACAAAGGTGGCAAATGCTTCATTTGA	615	0.4374	MEIIGFGFRPTEEELVDYYLKHRLLGDDPRVHVIPDIDLCEVEPWEVPELLAASDVQFYLPEWVFFSPVDFKYSNSKRVNRTTKCGFWKPTGKDRDIRSVDTNTLIATKKTLVYYEGRVSRGVKSNWVIHEYHAVTFHESQRTSVLCRLMEKPGKITEDEGEPSRNMVSGYENPAIAGGISSRGTYTGIKNEDSFLHKGGKCFI*	205

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lapu10g00314	204	Gene3D	NAC domain	11	156	IPR036093	GO:0003677\|GO:0006355
	Lapu10g00314	204	ProSiteProfiles	NAC domain profile.	2	152	IPR003441	GO:0003677\|GO:0006355
	Lapu10g00314	204	Pfam	No apical meristem (NAM) protein	5	133	IPR003441	GO:0003677\|GO:0006355
	Lapu10g00314	204	PANTHER	NAC DOMAIN-CONTAINING PROTEIN 82-RELATED	5	165	-	-
	Lapu10g00314	204	SUPERFAMILY	NAC domain	4	152	IPR036093	GO:0003677\|GO:0006355

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lapu10g00314	Lapu-Chr10	5502002	5504350	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lapu10g00314	4	153	NAC Transcription Factor Family	AT4G35580	50.000	2.07e-43	150

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	NAC	Lapu10g00314		NAM	3.6e-26	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lapu10g00314	-		-	vra:106753224	322.783