Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00310 ATGGAGATTGTAGGATTCGGTTTTCGTCCCACAGAAGAAGAACTTGTCAACTTTTACCTCAAACACAAGTTGCTCGGAGATGATCCCCGTGTCGACGTCATGACTGTCATAGATCTTCTCAAAGTGGAACCTTGGGAAATACCAGCGATGTTAGCTGAATCAGTAATACAATTCAAAGGCCCAGAATGGTTTTTCTTCCGTCGTGTTCGTTTCAAGTACCAAAACAGTAAAAGGAATGACCGGAAAACCAAGTGTGGCTACTGGAAACCCACTGGAAAAGACCGTAAAGTTCGGACCTGGGCCACCAACACTGTCATTGGGACTAAGAAGACTCTTGTTTTCCAAAGTCCTTCCAAAGGTGTCCAGGCCAAGTGGGTTATTCACGAATATCACGCTGGTCCTGGTACCTTCAATGAAAACCAGAGGAATTTTGTTTTATGCCGCTTGATAAAGAAACCTGGGAAAACAACTGAAAAGGGAATTGGAGCACGGATCTCTGATGAAGGGGAATCCAGTGGAAGTACGGTTTCTGACTATGAAAATCAGGCAATGGCAGAAGGAGTTGCATCTGGAGGTACTTCTACGGGAATGGAAACATTCTGTCGGGCAACACCTCAGACAGAGAAATACACCTCCCCAGTAGAGCAGTCTCTAACTGATGTTGGGCAGGATGATGCATCTTTTCCAAACTATCCATTGAACAGTATCTGTTTTAGAAATGAAAACAACATTCACCAGGTTTCCTCCGAAACTACACAGGTTTCCTACGAAACTACAAAGGTTTCCTCCGAAACTACAAAGGTTTCTTCCGAAACTACAAAGGTTTCCTCCGAAACTACACAGGTTTCCTCCGAAACTACACAGGTTTCCTCCGAAACTACACAGGTTTCCTCCGAAACTACACAGGTTTCCTCCGAAACTACACAGGTTTCCTCCGAAACTACACAGGTTCCCTCCGAGGTTCCCTCCAAAACTACGCAGGTTCCCTCCGAAACTACACAGGTTCCCTCCCTCTGA 1017 0.4533 MEIVGFGFRPTEEELVNFYLKHKLLGDDPRVDVMTVIDLLKVEPWEIPAMLAESVIQFKGPEWFFFRRVRFKYQNSKRNDRKTKCGYWKPTGKDRKVRTWATNTVIGTKKTLVFQSPSKGVQAKWVIHEYHAGPGTFNENQRNFVLCRLIKKPGKTTEKGIGARISDEGESSGSTVSDYENQAMAEGVASGGTSTGMETFCRATPQTEKYTSPVEQSLTDVGQDDASFPNYPLNSICFRNENNIHQVSSETTQVSYETTKVSSETTKVSSETTKVSSETTQVSSETTQVSSETTQVSSETTQVSSETTQVSSETTQVPSEVPSKTTQVPSETTQVPSL* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00310 338 Gene3D - 243 295 - -
Lapu10g00310 338 MobiDBLite consensus disorder prediction 248 338 - -
Lapu10g00310 338 ProSiteProfiles NAC domain profile. 2 152 IPR003441 GO:0003677|GO:0006355
Lapu10g00310 338 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 277 - -
Lapu10g00310 338 Gene3D NAC domain 11 157 IPR036093 GO:0003677|GO:0006355
Lapu10g00310 338 Pfam No apical meristem (NAM) protein 4 131 IPR003441 GO:0003677|GO:0006355
Lapu10g00310 338 SUPERFAMILY NAC domain 4 152 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00310 Lapu-Chr10 5470077 5475557 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00310 4 152 NAC Transcription Factor Family AT3G49530 44.156 4.65e-37 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lapu10g00310 NAM 6.3e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00310 - - vun:114167597 321.627