Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00306 ATGACGACTATGGAACCTAGAGTGATCGGGGATTACATAATGGGTGCTCCAATAGGGTCGGGTTCCTTTGCGGTGGTATGGCGTTCAAGGCACCGAGTTTCGGGTTTAGAGGTTGCAATTAAGGAGATTGACAAGAGACAACTCAGTCCCAAAGTCAAGGAACACCTTCTCAAAGAGATTTCTATCCTTAGCACCATCAAACACCCCAACATCGTTAGACTCTTCGAGGCAATTCAGACCAATGACAGGATTTACCTTGTTTTGGAGTACTGTGCTGGTGGGGACCTTGCTGCTTACATTCAACGTCATGGAAAGGTTTCTGAAACGGTTGCACGCCATTTCATGAGGCAATTGGCTGCCGGGTTACAGGTGCTTCAAGAAAAGAACCTCATCCACAGAGATTTAAAACCACCGAATTTACTATTGGCAACTACAGCAGCTACACCAATTATGAAAATAGGAGATTTTGGTTTTGCAAGGTCTCTCACACCCCAGGGTTTGGCTGATACACTATGTGGTTCACCTTATTACATGGCTCCAGAGATAATTGAAAATCAAAAATACGATGCCAAGGCTGATTTATGGAGTGTTGGAGCAATATTGTATCAACTAGTGATTGGGAGGCCACCATTTGAAGGAAATAGTCAATATCAGCTTTTTCAAAATATTTTGTCATCCACTGAACTGTACTTTCCGCCAGAGGCATTAAAAGAGCTACATTCTGATTGTTTGGATCTTTGCAGAAACCTTTTACGTCAAAATCCTGATGAGAGATTAACATTCAAGGCATTCTTCAATCACAATTTCCTTCAGAATCCCAGGTCAACTGTAGAAAAAATTACAGTTCATCAATCAGGTGGCTCTCTGTCTGAGATGTCTCCAACTATTGAAAGTAATAAGATGGTGAAGGTTGTTGATGCTGGTACTCATTTTTTAAATCAACCCAGAGTTTCCCGTTTAATGCAGTCTGTGGAGAAAGACTATGTCCTCGTCAATTCCCATTTTGCATCATTGGAGTCTTTTTCTGACTACTTTGATGCATCTGTGCAAGATGATTCCTCATGCAGTATTTCTCCCATTCGATCAAAGAGTACTAATCTGGATATTGGAGTAGCAAAGCAAAAAAAGGATCTGACCTCTTCCTCCACTAGAGGATTAGAGAATTTAAAAAGCAATAAATTTGAGGCATGTGTGGCATCATGTGAATTTACTGCTTTAAGGAAAGAGCATGAAATTTCCTCACTGCACCCTTCAAACAGGTTGGAGTTGTTGCATCAGTATGTGAAGATCCTTAAAGAACTTTCACAACAAAAGTATGATACAGGACTGTATCTAGAGTCACTTGCAGTTGAGTTGGTGGTTTTGGCCATATGGAAGAAGGCCCTAGAAATGTGTAACTCTTGGGTAGCCTCCCTTACTAGGGGGAGTGAGTCTGAAAGCAGTTCAATTAATGAATCTATATCTTCAAGTAATGTGGAGTTAACACAGACTTCAGAACCGAAAATAAATTATAGTGATCCTCCGTCTGTGTCCATGTGGGTCAAACATGAGTTTATTGTTGCTGTTGATCGTGCTGAAAAACTATCATGTCATATTCAAAATATGGATGGGGCTGCTGAGATGCCAGATGCAATGGAAATTATATTCCAAAACGCTCTCTCAATTGGGACAAGTGGTGCGGTAGATGAATATATGGAGAACAGAAATAGGGCTAATGCGTCTTACTCAAGAGCGATGCTGCTACTTTCATTTTTGGTGAGAGAAGCAGAGAACCTTCCACTGAACCCACCATTTTCACTCATTGCCACTAATAAAGAGAGAATCTTACATTACATTCACATATTGCAGTCTCGTAAGAAATCTTCATTGGAGTCCTCTCCAAATAAGTCAGATTCACTTACATCAAAGTAA 1911 0.4066 MTTMEPRVIGDYIMGAPIGSGSFAVVWRSRHRVSGLEVAIKEIDKRQLSPKVKEHLLKEISILSTIKHPNIVRLFEAIQTNDRIYLVLEYCAGGDLAAYIQRHGKVSETVARHFMRQLAAGLQVLQEKNLIHRDLKPPNLLLATTAATPIMKIGDFGFARSLTPQGLADTLCGSPYYMAPEIIENQKYDAKADLWSVGAILYQLVIGRPPFEGNSQYQLFQNILSSTELYFPPEALKELHSDCLDLCRNLLRQNPDERLTFKAFFNHNFLQNPRSTVEKITVHQSGGSLSEMSPTIESNKMVKVVDAGTHFLNQPRVSRLMQSVEKDYVLVNSHFASLESFSDYFDASVQDDSSCSISPIRSKSTNLDIGVAKQKKDLTSSSTRGLENLKSNKFEACVASCEFTALRKEHEISSLHPSNRLELLHQYVKILKELSQQKYDTGLYLESLAVELVVLAIWKKALEMCNSWVASLTRGSESESSSINESISSSNVELTQTSEPKINYSDPPSVSMWVKHEFIVAVDRAEKLSCHIQNMDGAAEMPDAMEIIFQNALSIGTSGAVDEYMENRNRANASYSRAMLLLSFLVREAENLPLNPPFSLIATNKERILHYIHILQSRKKSSLESSPNKSDSLTSK* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00306 636 SMART serkin_6 12 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00306 636 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Lapu10g00306 636 CDD STKc_ATG1_ULK_like 18 269 - -
Lapu10g00306 636 FunFam Non-specific serine/threonine protein kinase 1 92 - -
Lapu10g00306 636 SUPERFAMILY Protein kinase-like (PK-like) 8 308 IPR011009 -
Lapu10g00306 636 ProSiteProfiles Protein kinase domain profile. 12 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00306 636 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 5 552 IPR045269 GO:0004674|GO:0006914
Lapu10g00306 636 FunFam Serine/threonine-protein kinase ATG1 4 307 - -
Lapu10g00306 636 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Lapu10g00306 636 MobiDBLite consensus disorder prediction 480 503 - -
Lapu10g00306 636 Pfam Protein kinase domain 15 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00306 636 Gene3D Transferase(Phosphotransferase) domain 1 3 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00306 Lapu-Chr10 5412921 5418030 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00306 8 306 CBL-interacting serine-threonine protein kinases AT2G30360 32.468 5.96e-49 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Lapu10g00306 Pkinase 9e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00306 - K08269 gmx:100779262 955.281