Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00305 ATGGACGCGTATTCCTCTGGAGAAGAAGTTGTTGTAAAGACGAGAAAACCGTACACAATCACAAAGCAAAGGGAACGATGGACAGAGGAGGAGCATAATAGGTTTCTAGAAGCTTTGAAACTGCACGGGCGAGCATGGCAGCGCATAGAAGAGCATATAGGAACAAAGACTGCCGTGCAAATCAGGAGCCACGCACAAAAGTTTTTTACAAAGTTGGAGAAAGAGGCTCTTGTAAAGGGTGTTCCAATTGGACAAGCTCTTGATATAGATATTCCCCCTCCACGGCCTAAAAGAAAACCAAGCAATCCTTATCCTCGGAAGACCAGGATTGGTACCGCGACATTACATAGTGGAGCAAAGGATGGAAAGCTCAATTTAGTTGAGTCCTCACATGACAACCAAGCACTGGACTTGGAAAAAGAACCACTTCCGGAGAAATATGATTTAGACGAAGGGCCAACAACAGTAAAGGAAAATAAGGATGAGAACTGCTCAAAAGTATTTAAAGTTATCCAGGAGGTACCCTGTTCCTCTATATCTTCAGCAAATAAGAGTTCAATATCTATGTCAGTGCCGCTGGGAAATTCATGCTTCTTAAAGGAGATTACTACTTCAGTGAAAGATGTAGTAGCTCGAGATGAAAAAACTGAATCATTTCTGACTTTTGAACTTGAAAATGGGAATTTGGAGATCAATGATGGAGAGCAGACTAATGGCACTAGTAAAAACTCCACGTTAGAGAATTCTGATTCTTTACAAATGAAATTGGTTCAAAATGAGAAAACAGATGGTCTCGATTGTGCATTAACAATAGATGGGATGCAAGGCAATCAGAATTACCCTAGACATGTAACTGTGCACGTTGTTGACGGGAACCTTGCAACAAGTACTCAAAATCCGTCACAACATATGTTGTTTCGAGACTCCATGTTTCAGCCAATAGGAGGGGTTAATGGGCAACCAAATATTTTCACCAATTCAGGTCCATCAAACACAAGTGAAAGTCAAAATAACACAGAACGATCTTCTGTTCATCAATCATTTCTTCCTTATCCCCCCTTCACACAACACAACCAGGACGATTACCAATCATTTCTTCACATGTCTTCCACATTTTCTAATCTTGTTGTCTCCACCTTGCTTCAAAACCCAGCAGCCCATGCTGCAGCAAGTTTCGCTGCTACATTTTGGCCCTATGCAAATCCAGAAACTTCAGCAGATTCTCCTAGGTGCTCCCAAGGAGGTTTCACATCTAGACAAATCGGTTCCCCTCCAAGCGTTGCAGCTATTGCAGCCGCTACTGTAGCTGCTGCAACTGCGTGGTGGGCAGCTCATGGATTGCTTCCTTTGTGTGCTCCTCTTCATACTGGCTTTGCATGTCCTCCTGCATCTGTGACTGCAGTCCCATCAATGAGTACTGCTGAAGCACCAGCTCTAAAGGCGGAACTAGAAAAGAATACTGTACAAAATCCTCCTATGCAAGATCAGATGATGCATCCAGAATACTCGGAAGCTCCGCAAGCTCAACATTCAGCTTCAAAGTCACAAGCTGTCATTTCATCAGATTCTGAAAGTGGAGATGCCAAGTTAAATACTTCACCAGAGGCCACTGATCATGAGACGAAAGAAACAATTTCTGAGCACGTAGATGCCAACAAAACGAAGGGCAGAAAACAAGTTGACCGTTCCTCGTGTGGTTCCAACACAGCGTCAAGCAGCGATGTGGAAACTGATGCACTAGGGAAGGATGAGAAAGGGAAGGAAGAGCCTGAAACACCCGATGCTAACCATTTAGCCATTGAGTTTAGTAATCGTCGTAGAAGCATTTGCAACCTTACTGATTCTTGGAAAGAGGTCTCTGAAGAGGGGAGACTAGCCTTTCAGGCTCTATTCTCCAGAGAGGTGTTGCCTCAAAGCTTTTCACCTCCTCATGCGTTAAAGAATAAGGACCAAATGGACATCACCAATGATAACAAGCAACACATGGATGACAAAAATGAAGACCTTGACAGCAGGAAATGCAGTTCTAATTATAAAGCAATGCAGAAAAACCCGCTATTGGTAGAAAATAACGTGGGACTGTTAACCATAGGGCTTGGACAAGGAAAGCTGAAGACTCGTCGAACAGGCTTTAAACCCTACAAAAGATGTTCCATGGAGGCCAAGGAAAATAGGGTTGGAGCGAGCAATCAAGGTGAAGAGAAAGGTTGTAAAAGAATACGTTTGGAAGGGGAGACTTGA 2241 0.4337 MDAYSSGEEVVVKTRKPYTITKQRERWTEEEHNRFLEALKLHGRAWQRIEEHIGTKTAVQIRSHAQKFFTKLEKEALVKGVPIGQALDIDIPPPRPKRKPSNPYPRKTRIGTATLHSGAKDGKLNLVESSHDNQALDLEKEPLPEKYDLDEGPTTVKENKDENCSKVFKVIQEVPCSSISSANKSSISMSVPLGNSCFLKEITTSVKDVVARDEKTESFLTFELENGNLEINDGEQTNGTSKNSTLENSDSLQMKLVQNEKTDGLDCALTIDGMQGNQNYPRHVTVHVVDGNLATSTQNPSQHMLFRDSMFQPIGGVNGQPNIFTNSGPSNTSESQNNTERSSVHQSFLPYPPFTQHNQDDYQSFLHMSSTFSNLVVSTLLQNPAAHAAASFAATFWPYANPETSADSPRCSQGGFTSRQIGSPPSVAAIAAATVAAATAWWAAHGLLPLCAPLHTGFACPPASVTAVPSMSTAEAPALKAELEKNTVQNPPMQDQMMHPEYSEAPQAQHSASKSQAVISSDSESGDAKLNTSPEATDHETKETISEHVDANKTKGRKQVDRSSCGSNTASSSDVETDALGKDEKGKEEPETPDANHLAIEFSNRRRSICNLTDSWKEVSEEGRLAFQALFSREVLPQSFSPPHALKNKDQMDITNDNKQHMDDKNEDLDSRKCSSNYKAMQKNPLLVENNVGLLTIGLGQGKLKTRRTGFKPYKRCSMEAKENRVGASNQGEEKGCKRIRLEGET* 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00305 746 MobiDBLite consensus disorder prediction 533 560 - -
Lapu10g00305 746 ProSiteProfiles SANT domain profile. 22 73 IPR017884 -
Lapu10g00305 746 MobiDBLite consensus disorder prediction 725 746 - -
Lapu10g00305 746 MobiDBLite consensus disorder prediction 230 249 - -
Lapu10g00305 746 FunFam protein REVEILLE 6 isoform X1 26 74 - -
Lapu10g00305 746 Pfam Myb-like DNA-binding domain 24 67 IPR001005 -
Lapu10g00305 746 SMART sant 23 71 IPR001005 -
Lapu10g00305 746 PANTHER SWI/SNF COMPLEX-RELATED 7 646 - -
Lapu10g00305 746 MobiDBLite consensus disorder prediction 561 576 - -
Lapu10g00305 746 MobiDBLite consensus disorder prediction 134 158 - -
Lapu10g00305 746 MobiDBLite consensus disorder prediction 577 595 - -
Lapu10g00305 746 MobiDBLite consensus disorder prediction 320 348 - -
Lapu10g00305 746 MobiDBLite consensus disorder prediction 506 532 - -
Lapu10g00305 746 MobiDBLite consensus disorder prediction 503 596 - -
Lapu10g00305 746 CDD SANT 26 69 IPR001005 -
Lapu10g00305 746 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 73 IPR017930 -
Lapu10g00305 746 SUPERFAMILY Homeodomain-like 18 74 IPR009057 -
Lapu10g00305 746 NCBIfam myb-like DNA-binding domain, SHAQKYF class 22 71 IPR006447 GO:0003677
Lapu10g00305 746 ProSiteProfiles Myb-like domain profile. 19 69 IPR001005 -
Lapu10g00305 746 Gene3D - 26 73 - -
Lapu10g00305 746 MobiDBLite consensus disorder prediction 86 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00305 Lapu-Chr10 5395196 5412474 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lapu10g00305 Myb_DNA-binding 2e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00305 K12133 - gmx:100101859 1255.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00305 10 5395196 5412474 Lapu10g00305 10 5395196 5412474 ECH