Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00301 ATGGCCATGTACACGGTCACAGAGCTTGGCATTTTTGATATCATAGCCAAAGAAGGTGTGGGTGCCAAACTATCTGCAGAGGACATTGCAGCACAGCTTCCATGCAAGAATTCAGAAGCAGCCACGATGCTTGATCGTATCTTAAGACTCCTTGCATGTCACTCAGTCATTGACTGCACAGTGGTTGCTGATGAACATGGTTCTCCTCCACAACTGAAGAGGCTCTATGGCCTGAACTCTGTGGCCAAATACTTTGCTTCCATTCATGGTGCTGGCTCTCTAGGCCCTTTCATGATGTTGGCTCATGACAAGGCCTCCCTTCGCAGCTGGTACCAACTAAAAGATGCAATTCTGGAAGGAGGAATTCCATTCAACCGGGCCCATGGCAAACACTTGTTTGAATATTCCGATATGAACTCAAGCTTCAATAATCTTTTTATAGCAACAATGACCAACCGTGCAACTTTAATTATGAAGAAGATTGTGGAATCCTACAAGGGGTTTGAGCACATCAATAGGCTGGTTGATGTTGGAGGGGGCCATGGAATCTCTCTTAACATAATAACTTCAAAATACCCTCACATCAAGGGTATCAACTTTGACTTGCCTCATGTCATACAGAATGCCTCTCCCTATCCTGGAGTGGAGCATGTGGAAGGAGATATGTTTGAAAGTGTGCCTAAAGCAGATTGCGTTTTTATGATGTGTGTGCTTCATGATTGGAGTGATGAATGGTGCTTGAAGGTGCTGAAGAACTGCTATGATGCAGTTCCTAGTGATGGAAAGGTGATTGTTGTGGACGGAGTTCATCCATTTGAACCAAAGACAACATCTTCA 837 0.4444 MAMYTVTELGIFDIIAKEGVGAKLSAEDIAAQLPCKNSEAATMLDRILRLLACHSVIDCTVVADEHGSPPQLKRLYGLNSVAKYFASIHGAGSLGPFMMLAHDKASLRSWYQLKDAILEGGIPFNRAHGKHLFEYSDMNSSFNNLFIATMTNRATLIMKKIVESYKGFEHINRLVDVGGGHGISLNIITSKYPHIKGINFDLPHVIQNASPYPGVEHVEGDMFESVPKADCVFMMCVLHDWSDEWCLKVLKNCYDAVPSDGKVIVVDGVHPFEPKTTSS 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00301 279 Gene3D Vaccinia Virus protein VP39 143 278 IPR029063 -
Lapu10g00301 279 Gene3D - 1 161 IPR036388 -
Lapu10g00301 279 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 279 IPR016461 GO:0008168
Lapu10g00301 279 Pfam O-methyltransferase domain 110 277 IPR001077 GO:0008171
Lapu10g00301 279 Pfam Dimerisation domain 1 52 IPR012967 GO:0046983
Lapu10g00301 279 SUPERFAMILY "Winged helix" DNA-binding domain 1 86 IPR036390 -
Lapu10g00301 279 FunFam Caffeic acid 3-O-methyltransferase 1 85 - -
Lapu10g00301 279 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 93 275 IPR029063 -
Lapu10g00301 279 PANTHER O-METHYLTRANSFERASE 1 272 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00301 Lapu-Chr10 5330674 5332116 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00301 1 279 Monolignol Biosynthesis Gene Families AT5G54160 50.179 1.51e-97 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00301 K13066 - gmx:100788873 474.167